RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CLDN8P56748 225 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 OR4F3Q6IEY1 312 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 TBPL2Q6SJ96 375 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 OR8J3Q8NGG0 315 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 OR10Q1Q8NGQ4 319 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 OR8D1Q8WZ84 308 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SGCDQ92629 289 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PROX1Q92786 737 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FGF13Q92913 245 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FAM162AQ96A26 154 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 DTD2Q96FN9 168 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FOPNLQ96NB1 174 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ZNF300Q96RE9 604 aaPredicted RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 ADGRE2Q9UHX3 823 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 GRXCR2A6NFK2 248 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 H3BM21 787 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 CCRL2O00421 344 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PSIP1O75475 530 aaKnown RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 PRSS23O95084 383 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 MFN2O95140 757 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 NFATC1O95644 943 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 C1QCP02747 245 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 MYCLP1P12525 358 aaPredicted RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 C6P13671 934 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 JUPP14923 745 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 GGT1P19440 569 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ACVR2AP27037 513 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PKLRP30613 574 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 RRM2P31350 389 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PRLHRP49683 370 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ZNF234Q14588 700 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 STARD3Q14849 445 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 CATSPEREQ5SY80 951 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ATAD3CQ5T2N8 411 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 TMEM236Q5W0B7 351 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 NOXRED1Q6NXP6 359 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ENPP6Q6UWR7 440 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PAGE2Q7Z2X7 111 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 TRMT11Q7Z4G4 463 aaKnown RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 SYT12Q8IV01 421 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ETFBKMTQ8IXQ9 262 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SYTL1Q8IYJ3 562 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 C10orf111Q8N326 155 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ZNF555Q8NEP9 628 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 RORBQ92753 470 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 NUS1Q96E22 293 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 CMTM7Q96FZ5 175 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 OR4K3Q96R72 315 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 MMP27Q9H306 513 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 CARS2Q9HA77 564 aaKnown RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 C12orf10Q9HB07 376 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SGK2Q9HBY8 427 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SLC5A10A0PJK1 596 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 CENPXA8MT69 81 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 CCDC159P0C7I6 412 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 PRPS2P11908 318 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 TCF3P15923 654 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 AMD1P17707 334 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 GALK2Q01415 458 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 FCHO2Q0JRZ9 810 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DUSP7Q16829 419 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 SMU1Q2TAY7 513 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 ZFP69Q49AA0 526 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 GGTA1PQ4G0N0 100 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 C9orf50Q5SZB4 431 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DOK6Q6PKX4 331 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 ELMOD2Q8IZ81 293 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 CLEC4FQ8N1N0 589 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 C2orf73Q8N5S3 287 aaPredicted RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 ESX1Q8N693 406 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 GPR156Q8NFN8 814 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 FAR1Q8WVX9 515 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 ZNF566Q969W8 418 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 COQ10AQ96MF6 247 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 MTIF3Q9H2K0 278 aaKnown RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 TM9SF3Q9HD45 589 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DYRK4Q9NR20 520 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 OSGIN1Q9UJX0 560 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 UTS2RQ9UKP6 389 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 B8ZZF3 427 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 FSHRP23945 695 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 IMPA1P29218 277 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 NUDT1P36639 197 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DEFA1P59665 94 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 DEFA3P59666 94 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 CHRNB3Q05901 458 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 PPP1R8Q12972 351 aaKnown RBP11.12□□□□□ -0.63
USP35-207ENST00000530546 CDONQ4KMG0 1287 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 RUNDC3AQ59EK9 446 aa11.12□□□□□ -0.63
USP35-207ENST00000530546 PRR23BQ6ZRT6 265 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms