RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 C11orf24Q96F05 449 aaPredicted RBP13.77□□□□□ -0.21
TTC39A-216ENST00000530004 SERPINI1Q99574 410 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 CCDC3Q9BQI4 270 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 TWSG1Q9GZX9 223 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 CLMPQ9H6B4 373 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 NT5DC2Q9H857 520 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 GID8Q9NWU2 228 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 ADGRE2Q9UHX3 823 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 PACSIN3Q9UKS6 424 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 PCDHGA7Q9Y5G6 932 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 OR6C74A6NCV1 312 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 OR5K3A6NET4 321 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SAP18O00422 153 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 ZW10O43264 779 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SORBS2O94875 1100 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 GP1BAP07359 652 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PCSK2P16519 638 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 TYRP1P17643 537 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PTX3P26022 381 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 CAPZBP47756 277 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 MTTPP55157 894 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 RAE1P78406 368 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 GPLD1P80108 840 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 KPNB1Q14974 876 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 FAM174BQ3ZCQ3 159 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PAGE3Q5JUK9 113 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 KIAA1614Q5VZ46 1190 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 KLHL35Q6PF15 583 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 OOSP2Q86WS3 158 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 HPS6Q86YV9 775 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 OR10G6Q8NH81 332 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 WDR60Q8WVS4 1066 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SLC22A18Q96BI1 424 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 CCDC124Q96CT7 223 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 EGLN2Q96KS0 407 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SLC39A3Q9BRY0 314 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 DPH7Q9BTV6 452 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 TMEM184CQ9NVA4 438 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 HRASLS2Q9NWW9 162 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PPT2Q9UMR5 302 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 TM4SF5O14894 197 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 LCMT2O60294 686 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 LRATO95237 230 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PROS1P07225 676 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 POLR2CP19387 275 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SERPINB1P30740 379 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 TIA1P31483 386 aaKnown RBP eCLIP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 GRK3P35626 688 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 CLNS1AP54105 237 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 RIPK1Q13546 671 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 NFYCQ13952 458 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 AMZ1Q400G9 498 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PIGGQ5H8A4 983 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SPANXN4Q5MJ08 99 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 C1orf146Q5VVC0 180 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 NKAIN2Q5VXU1 208 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SLC2A7Q6PXP3 512 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 NET1Q7Z628 596 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 DEFB124Q8NES8 71 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 LRRC58Q96CX6 371 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 AHCYL2Q96HN2 611 aaKnown RBP13.76□□□□□ -0.21
TTC39A-216ENST00000530004 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 ADA2Q9NZK5 511 aa13.76□□□□□ -0.21
TTC39A-216ENST00000530004 PTPRZ1P23471 2315 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 PCM1Q15154 2024 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 A0A1W2PQM1 296 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 TRBC2A0A5B9 178 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 DUX1O43812 170 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 PCDH7O60245 1069 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 ENTPD5O75356 428 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 ATP6V1G2O95670 118 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 TBX6O95947 436 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 IL6P05231 212 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 PGRP06401 933 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 ANXA4P09525 319 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 CD1CP29017 333 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 CAPRIN1Q14444 709 aaKnown RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 KIR2DS3Q14952 304 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 TRIP6Q15654 476 aaKnown RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 TRMT5Q32P41 509 aaKnown RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 C6orf163Q5TEZ5 329 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 COMMD6Q7Z4G1 85 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 GLRX5Q86SX6 157 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 RIMKLAQ8IXN7 391 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 METTL4Q8N3J2 472 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 RNF148Q8N7C7 305 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 CDC26Q8NHZ8 85 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 WDR48Q8TAF3 677 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 SLC13A3Q8WWT9 602 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 GFM2Q969S9 779 aaKnown RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 TMEM74Q96NL1 305 aa13.75□□□□□ -0.21
TTC39A-216ENST00000530004 HOPXQ9BPY8 73 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 GPATCH1Q9BRR8 931 aaKnown RBP13.75□□□□□ -0.21
TTC39A-216ENST00000530004 MS4A8Q9BY19 250 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms