RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 C15orf59Q2T9L4 293 aaPredicted RBP4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 PARP15Q460N3 678 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 CCDC14Q49A88 953 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 TMEM52BQ4KMG9 183 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 LRRC73Q5JTD7 316 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 CFAP58Q5T655 872 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 PAPD7Q5XG87 772 aaKnown RBP4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 BRAT1Q6PJG6 821 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 ENPP7Q6UWV6 458 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 LEKR1Q6ZMV7 388 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 SLFN11Q7Z7L1 901 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 DNAAF5Q86Y56 855 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 OR8H2Q8N162 312 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 TMEM217Q8N7C4 229 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 RTL3Q8N8U3 475 aaKnown RBP4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 HCAR2Q8TDS4 363 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 WIPF2Q8TF74 440 aaPredicted RBP4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 NTAN1Q96AB6 310 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 TMEM159Q96B96 161 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 SGF29Q96ES7 293 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 NPAS1Q99742 590 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 C11orf70Q9BRQ4 267 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 LRRN3Q9H3W5 708 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 NRIP3Q9NQ35 241 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 MBNL1Q9NR56 388 aaKnown RBP4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 NSMCE4AQ9NXX6 385 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 DONSONQ9NYP3 566 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 NEU3Q9UQ49 428 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 PKP3Q9Y446 797 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 MFHAS1Q9Y4C4 1052 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 BOD1L1Q8NFC6 3051 aa4.99□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM72CH0Y354 149 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 OVOL3O00110 214 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CACNB4O00305 520 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 NVLO15381 856 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 PCCBP05166 539 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CALB1P05937 261 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TPM2P07951 284 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 LIPCP11150 499 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 SFTPCP11686 197 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 KRT3P12035 628 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 PKMP14618 531 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TFEBP19484 476 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CHMP24386 653 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TYK2P29597 1187 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 NSFP46459 744 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 HDAC4P56524 1084 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 GSCP56915 257 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CCL7P80098 99 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 HSF1Q00613 529 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CDR2Q01850 454 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 SYCP1Q15431 976 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 ALG11Q2TAA5 492 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 WSCD2Q2TBF2 565 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 RAB6CQ53S08 254 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 HSP90AA4PQ58FG1 418 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 RUNDC3AQ59EK9 446 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM72AQ5TYM5 149 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM72DQ6L9T8 149 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 ZNF793Q6ZN11 406 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 PHLDB2Q86SQ0 1253 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM72BQ86X60 149 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 PAQR4Q8N4S7 273 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CCDC185Q8N715 623 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 ENDOVQ8N8Q3 282 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 GPT2Q8TD30 523 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM172AQ8WUF8 416 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 SLC20A1Q8WUM9 679 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TSACCQ96A04 125 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 HMCESQ96FZ2 354 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 RSRC1Q96IZ7 334 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 ZNF641Q96N77 438 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CMKLR1Q99788 373 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 PIMREGQ9BSJ6 248 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 APOOQ9BUR5 198 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TRIM4Q9C037 500 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CTDSP1Q9GZU7 261 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 SPRTNQ9H040 489 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 RAB6CQ9H0N0 254 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 CATSPERBQ9H7T0 1116 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TMEM45AQ9NWC5 275 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 AKAP7Q9P0M2 348 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 UBA2Q9UBT2 640 aaPredicted RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 PISDQ9UG56 409 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 NOCTQ9UK39 431 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 APPL1Q9UKG1 709 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 LOXL2Q9Y4K0 774 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 TLN1Q9Y490 2541 aaKnown RBP4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 KIF26BQ2KJY2 2108 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 ICE1Q9Y2F5 2266 aa4.98□□□□□ -1.61
AMBRA1-209ENST00000529963 A0A1W2PQM1 296 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TSPAN11A1L157 253 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SAC3D1A6NKF1 404 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CASC3O15234 703 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 INSIG1O15503 277 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ZW10O43264 779 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TMCC2O75069 709 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms