RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 DEPDC1Q5TB30 811 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 LETMD1Q6P1Q0 360 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 CYP20A1Q6UW02 462 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 ZCCHC7Q8N3Z6 543 aaKnown RBP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 HUS1BQ8NHY5 278 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF473Q8WTR7 871 aaKnown RBP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 FKBP10Q96AY3 582 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 NACC2Q96BF6 587 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 C19orf60Q96EN9 201 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 NSUN5Q96P11 429 aaKnown RBP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 OR1F2PQ96R84 312 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 SERINC2Q96SA4 455 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 PRPF18Q99633 342 aaKnown RBP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 FAIM2Q9BWQ8 316 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 MS4A8Q9BY19 250 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 GPR87Q9BY21 358 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 SLC6A16Q9GZN6 736 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 RABEP2Q9H5N1 569 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 MLXIPLQ9NP71 852 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 DMRT3Q9NQL9 472 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 CUTCQ9NTM9 273 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 RYDENQ9NUL5 291 aaKnown RBP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 C14orf105Q9NVL8 296 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 SIRT5Q9NXA8 310 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 TMEM9Q9P0T7 183 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 PISDQ9UG56 409 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 NDOR1Q9UHB4 597 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 KCND3Q9UK17 655 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 PSME2Q9UL46 239 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 PADI1Q9ULC6 663 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 SLC12A4Q9UP95 1085 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 SATB2Q9UPW6 733 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 EIF3LQ9Y262 564 aaKnown RBP7.56□□□□□ -1.2
SSBP3-211ENST00000528787 RNF11Q9Y3C5 154 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 MSRB2Q9Y3D2 182 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 AK5Q9Y6K8 562 aa7.56□□□□□ -1.2
SSBP3-211ENST00000528787 FEZF1A0PJY2 475 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 KRT87PA6NCN2 255 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 TMEM8BA6NDV4 472 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 C21orf140B9A014 251 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 CLDN4O14493 209 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 FFAR3O14843 346 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 POLR3GO15318 223 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 GPR42O15529 346 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF749O43361 778 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ERI3O43414 337 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 DYRK3O43781 588 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 LYPLA1O75608 230 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 BMP10O95393 424 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 PDYNP01213 254 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 PRPS2P11908 318 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 EPORP19235 508 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 BUD31P41223 144 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 SSR2P43308 183 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 GABRA4P48169 554 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 PDX1P52945 283 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 RPS15P62841 145 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 DCDP81605 110 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 SHC2P98077 582 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 MC1RQ01726 317 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 OCRLQ01968 901 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 DSG2Q14126 1118 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 SLC9A5Q14940 896 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 HEPACAMQ14CZ8 416 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 GPR19Q15760 415 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ZIC1Q15915 447 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ZXDCQ2QGD7 858 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 FBXO48Q5FWF7 155 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 TOR1AIP1Q5JTV8 583 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 METTL21CQ5VZV1 264 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 TMEM214Q6NUQ4 689 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 C6orf15Q6UXA7 325 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ZCCHC23Q6ZST2 131 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 IKBIPQ70UQ0 350 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 SPATA19Q7Z5L4 167 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 CPLX4Q7Z7G2 160 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 B3GNT8Q7Z7M8 397 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 NLGN4XQ8N0W4 816 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 BMPERQ8N8U9 685 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 NLGN4YQ8NFZ3 816 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 CEP70Q8NHQ1 597 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 MDM1Q8TC05 714 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 CREB3L4Q8TEY5 395 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 TWIST2Q8WVJ9 160 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 COL26A1Q96A83 441 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 CHMP6Q96FZ7 201 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 SLC46A1Q96NT5 459 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 IP6K3Q96PC2 410 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 MTERF1Q99551 399 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 KLHL25Q9H0H3 589 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 CAAP1Q9H8G2 361 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 WDR54Q9H977 334 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF304Q9HCX3 659 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 LYRM4Q9HD34 91 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 FAM60AQ9NP50 221 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 MKKSQ9NPJ1 570 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-211ENST00000528787 TMEM45AQ9NWC5 275 aa7.55□□□□□ -1.2
SSBP3-211ENST00000528787 C1orf109Q9NX04 203 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms