RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MRGPRX1Q96LB2 322 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 WDR92Q96MX6 357 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SARGQ9BW04 601 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 DOCK9Q9BZ29 2069 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 NTN4Q9HB63 628 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 USE1Q9NZ43 259 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 IFT80Q9P2H3 777 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 MOSPD1Q9UJG1 213 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 PCOLCE2Q9UKZ9 415 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 KCNK6Q9Y257 313 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 WDR37Q9Y2I8 494 aa14.15□□□□□ -0.14
ECHDC1-220ENST00000528402 ATG2BQ96BY7 2078 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 PRR23AA6NEV1 266 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 PDZK1P1A8MUH7 402 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 G3V2T6 193 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 H7BY64 318 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 PDLIM1O00151 329 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 UPK1AO00322 258 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 DLGAP1O14490 977 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 EI24O14681 340 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC31A1O15431 190 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 PABPC4LP0CB38 370 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 AHRP35869 848 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 ARHGDIAP52565 204 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 ARSFP54793 590 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 TUBA4AP68366 448 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 CSNK1G2P78368 415 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 MEF2AQ02078 507 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 VAC14Q08AM6 782 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 RPE65Q16518 533 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 LIN52Q52LA3 116 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 TTC23Q5W5X9 447 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 TRIM40Q6P9F5 258 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 ENPP6Q6UWR7 440 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 CBLL1Q75N03 491 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 NUDT13Q86X67 352 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 CLECL1Q8IZS7 167 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 C11orf65Q8NCR3 313 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF740Q8NDX6 193 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 OR52N2Q8NGI0 321 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 WDR48Q8TAF3 677 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 MAGEE2Q8TD90 523 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 ZFPM2Q8WW38 1151 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 PRAP1Q96NZ9 151 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 RBM4BQ9BQ04 359 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 ACAT2Q9BWD1 397 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 RBM4Q9BWF3 364 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 MIEF1Q9NQG6 463 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 IMP3Q9NV31 184 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 TUBA8Q9NY65 449 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 TAS2R9Q9NYW1 312 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 BAG5Q9UL15 447 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 MMP17Q9ULZ9 603 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 EXO1Q9UQ84 846 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 PCDHGA2Q9Y5H1 932 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 CFAP20Q9Y6A4 193 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 V9GYQ6 96 aa14.14□□□□□ -0.15
ECHDC1-220ENST00000528402 MYO10Q9HD67 2058 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 A0A1W2PRB8 838 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 YY2O15391 372 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 GUCY1B2O75343 617 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 SH3BGRLO75368 114 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 ALBP02768 609 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 DDCP20711 480 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 TPP2P29144 1249 aaPredicted RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 CMPK1P30085 196 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 AKT2P31751 481 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 SHMT2P34897 504 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 PCGF2P35227 344 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 BSGP35613 385 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 NUDT1P36639 197 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 MAPK12P53778 367 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 NR1H2P55055 460 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 CLCA4Q14CN2 919 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 SF1Q15637 639 aaKnown RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 KCTD21Q4G0X4 260 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 PATL1Q86TB9 770 aaKnown RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 PTOV1Q86YD1 416 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 CLEC4FQ8N1N0 589 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 FAM47BQ8NA70 645 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 LINC01555Q8NAE3 123 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 SRFBP1Q8NEF9 429 aaKnown RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 OR2A1Q8NGT9 310 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC22A18Q96BI1 424 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 NRBF2Q96F24 287 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 RMND5BQ96G75 393 aaPredicted RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 CARS2Q9HA77 564 aaKnown RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 CLK4Q9HAZ1 481 aaKnown RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 KCNK12Q9HB15 430 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 MRPS30Q9NP92 439 aaKnown RBP14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 IL1RAPQ9NPH3 570 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 ADPRHL2Q9NX46 363 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 OR6C2Q9NZP2 312 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 SNX7Q9UNH6 387 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 TRANK1O15050 2925 aa14.13□□□□□ -0.15
ECHDC1-220ENST00000528402 NUP214P35658 2090 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 VGLL3A8MV65 326 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 H3BNH8 94 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms