RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TGIF2Q9GZN2 237 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ACTR8Q9H981 624 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 FETUBQ9UGM5 382 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 TBK1Q9UHD2 729 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 BOD1L1Q8NFC6 3051 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 IGLV3-12A0A075B6K2 115 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 PSMD12O00232 456 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 PCDH17O14917 1159 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 C1QL1O75973 258 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 MYBL2P10244 700 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 PCNAP12004 261 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 CSRP3P50461 194 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 RAB8AP61006 207 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 TGM3Q08188 693 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 AIMP2Q13155 320 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 RAPSNQ13702 412 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 TECRLQ5HYJ1 363 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 FAAH2Q6GMR7 532 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 ZC3H7AQ8IWR0 971 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 PLD6Q8N2A8 252 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 GALNT16Q8N428 558 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 TEX19Q8NA77 164 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 ATP6V1E2Q96A05 226 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 GPR78Q96P69 363 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 MRPL57Q9BQC6 102 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 TXLNGYQ9BZA5 131 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 MRPL46Q9H2W6 279 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 NT5DC2Q9H857 520 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 XPR1Q9UBH6 696 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 C19orf25Q9UFG5 118 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 PCDHGA9Q9Y5G4 932 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 HS3ST3B1Q9Y662 390 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 ASH1LQ9NR48 2969 aaKnown RBP12.67□□□□□ -0.38
CAPN1-215ENST00000528396 CCDC88CQ9P219 2028 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 MAST4O15021 2626 aa12.67□□□□□ -0.38
CAPN1-215ENST00000528396 NSG1A0A0A6YYJ2 146 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 SMIM23A6NLE4 172 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 SOCS6O14544 535 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 SLC28A2O43868 658 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 GALR3O60755 368 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-215ENST00000528396 CLEC3AO75596 197 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 BMP10O95393 424 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 C8orf89P0DMQ9 161 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 MTHFD2P13995 350 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 KRT15P19012 456 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 TAC1P20366 129 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 IL10P22301 178 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 JAK1P23458 1154 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 PHEXP78562 749 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 EEF1A2Q05639 463 aaKnown RBP12.66□□□□□ -0.38
CAPN1-215ENST00000528396 GTF2H2Q13888 395 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 TBCCQ15814 346 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 GTF2H2CQ6P1K8 395 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 MED27Q6P2C8 311 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 TRIM40Q6P9F5 258 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 LAPTM4BQ86VI4 370 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 PDSS2Q86YH6 399 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 TMEM151BQ8IW70 566 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-215ENST00000528396 FDCSPQ8NFU4 85 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 OR11G2Q8NGC1 345 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 UTP15Q8TED0 518 aaKnown RBP12.66□□□□□ -0.38
CAPN1-215ENST00000528396 GAL3ST3Q96A11 431 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 C8orf44Q96CB5 159 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 PHF21BQ96EK2 531 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 WDR34Q96EX3 536 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 PEX11GQ96HA9 241 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 RBCK1Q9BYM8 510 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 SLC6A16Q9GZN6 736 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 RHBGQ9H310 441 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 ANKZF1Q9H8Y5 726 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 COPS7BQ9H9Q2 264 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-215ENST00000528396 PPCSQ9HAB8 311 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF358Q9NW07 568 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF451Q9Y4E5 1061 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 ASB1Q9Y576 335 aa12.66□□□□□ -0.38
CAPN1-215ENST00000528396 ERI3O43414 337 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 CHST10O43529 356 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 ALOX12BO75342 701 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 HPP00738 406 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 RNH1P13489 461 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 NR1D1P20393 614 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 EEF1DP29692 281 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 SERPINB1P30740 379 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 CASP2P42575 452 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 SLCO1A2P46721 670 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 OLR1P78380 273 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 BTN3A2P78410 334 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 KLRB1Q12918 225 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 DDX39BQ13838 428 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 NAA30Q147X3 362 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 MYBPC3Q14896 1274 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 PCBP2Q15366 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 METTL2BQ6P1Q9 378 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 TIFABQ6ZNK6 161 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 NDUFAF7Q7L592 441 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms