RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CTAGE15A4D2H0 777 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 STK16O75716 305 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 CTAGE8P0CG41 777 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 SOX11P35716 441 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 HYAL2Q12891 473 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 RBBP5Q15291 538 aaKnown RBP31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 MFSD4BQ5TF39 518 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 CTAGE6Q86UF2 777 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 CTAGE4Q8IX94 777 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 PLPP5Q8NEB5 264 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 FUT8Q9BYC5 575 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 LANCL2Q9NS86 450 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 CD274Q9NZQ7 290 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 PCDHGA10Q9Y5H3 936 aa31.18■■■□□ 2.58
SSSCA1-205ENST00000527920 ZNF860A6NHJ4 632 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 ZNF888P0CJ79 500 aaPredicted RBP31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 SMIM10L1P0DMW3 83 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 PRR30Q53SZ7 412 aaPredicted RBP31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 TMIGD1Q6UXZ0 262 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 CPEB2Q7Z5Q1 589 aaKnown RBP31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 ISCA2Q86U28 154 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 KRT78Q8N1N4 520 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 TBC1D20Q96BZ9 403 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 SMIM10Q96HG1 83 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 ACSS3Q9H6R3 686 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 NINJ2Q9NZG7 142 aa31.17■■■□□ 2.58
SSSCA1-205ENST00000527920 S100BP04271 92 aaPredicted RBP31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 LTA4HP09960 611 aaKnown RBP31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 SLBPQ14493 270 aaKnown RBP eCLIP31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 CUZD1Q86UP6 607 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 SHISA5Q8N114 240 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 OR5T3Q8NGG3 340 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 BRIX1Q8TDN6 353 aaKnown RBP31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 WDR34Q96EX3 536 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 PEX11GQ96HA9 241 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 SLC29A3Q9BZD2 475 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 ALG9Q9H6U8 611 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 IGSF5Q9NSI5 407 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 NUDT4Q9NZJ9 180 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 PRRC2CQ9Y520 2896 aaKnown RBP31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 SHANK1Q9Y566 2161 aa31.16■■■□□ 2.58
SSSCA1-205ENST00000527920 KERAO60938 352 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 FHP07954 510 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 TFEBP19484 476 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 JAK1P23458 1154 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 HSPA7P48741 367 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 STXBP1P61764 594 aaKnown RBP31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 RHAGQ02094 409 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 DLG1Q12959 904 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 PDK4Q16654 411 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 B3GNTL1Q67FW5 361 aaPredicted RBP31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 LANCL3Q6ZV70 420 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 ANKRD37Q7Z713 158 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 SNRNP40Q96DI7 357 aaKnown RBP31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 ACOT9Q9Y305 439 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 CSAG2Q9Y5P2 127 aa31.15■■■□□ 2.58
SSSCA1-205ENST00000527920 SETXQ7Z333 2677 aaKnown RBP31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 A0A087X1B8 175 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 MAGEB17A8MXT2 336 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 CLGNO14967 610 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 CHST10O43529 356 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 KCNC1P48547 511 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 TLR1Q15399 786 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 PLAG1Q6DJT9 500 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 LRRC70Q7Z2Q7 622 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 KIF18AQ8NI77 898 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 DNAJB14Q8TBM8 379 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 UBTD2Q8WUN7 234 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 ATOH8Q96SQ7 321 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 FMO2Q99518 471 aa31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 BARD1Q99728 777 aaKnown RBP31.14■■■□□ 2.58
SSSCA1-205ENST00000527920 PTPN13Q12923 2485 aa31.14■■■□□ 2.57
SSSCA1-205ENST00000527920 HMX2A2RU54 273 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 WFS1O76024 890 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 HPDP32754 393 aaPredicted RBP31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 TSFMP43897 325 aaKnown RBP31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 ABRAXAS2Q15018 415 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 MROH9Q5TGP6 573 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 LINC00696Q6ZRV3 163 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 RHEBL1Q8TAI7 183 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 GAL3ST3Q96A11 431 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 PTCD3Q96EY7 689 aaKnown RBP31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 EFCAB11Q9BUY7 163 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 CD244Q9BZW8 370 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 SCN3AQ9NY46 2000 aa31.13■■■□□ 2.57
SSSCA1-205ENST00000527920 CLEC3AO75596 197 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 GMPRP36959 345 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 RAB8AP61006 207 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 UBAP2LQ14157 1087 aaKnown RBP31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 E2F2Q14209 437 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 ZNF169Q14929 603 aaPredicted RBP31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 NSDHLQ15738 373 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 TBCCQ15814 346 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 FAM83EQ2M2I3 478 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 CENPLQ8N0S6 344 aaPredicted RBP31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 SNX31Q8N9S9 440 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 AICDAQ9GZX7 198 aa31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 CDC42EP4Q9H3Q1 356 aaKnown RBP31.12■■■□□ 2.57
SSSCA1-205ENST00000527920 KLHL31Q9H511 634 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms