RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 HRNRQ86YZ3 2850 aaPredicted RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 TCRBV7S2A1N4TA0A589 114 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 SAGE2PA6NJ88 616 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 E5RI56 91 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 NPIPA2E9PIF3 369 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 NPIPA3F8WFD2 350 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 AP3B1O00203 1094 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CHST10O43529 356 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 VAPBO95292 243 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 SYF2O95926 243 aaKnown RBP11.48□□□□□ -0.57
SRPRA-202ENST00000527817 IFNB1P01574 187 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 APRTP07741 180 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 MPC1LP0DKB6 136 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 JAK1P23458 1154 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 ACVR2AP27037 513 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 IMPA1P29218 277 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
SRPRA-202ENST00000527817 PEX19P40855 299 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CLCN7P51798 805 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 SESN2P58004 480 aaPredicted RBP11.48□□□□□ -0.57
SRPRA-202ENST00000527817 NIPAL1Q6NVV3 410 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 QSOX2Q6ZRP7 698 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 RGS9BPQ6ZS82 235 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 ZZZ3Q8IYH5 903 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CYP4Z2PQ8N1L4 340 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 OTUD6BQ8N6M0 293 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 TC2NQ8N9U0 490 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 OR5T3Q8NGG3 340 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 ZCCHC10Q8TBK6 192 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 RMND5BQ96G75 393 aaPredicted RBP11.48□□□□□ -0.57
SRPRA-202ENST00000527817 KIFC1Q9BW19 673 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CLEC4MQ9H2X3 399 aaPredicted RBP11.48□□□□□ -0.57
SRPRA-202ENST00000527817 ZDHHC11Q9H8X9 412 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CLK4Q9HAZ1 481 aaKnown RBP11.48□□□□□ -0.57
SRPRA-202ENST00000527817 TIMMDC1Q9NPL8 285 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 AMFRQ9UKV5 643 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 PLEKHA6Q9Y2H5 1048 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
SRPRA-202ENST00000527817 OR14I1A6ND48 311 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 MIF4GDA9UHW6 222 aaKnown RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 BCKDKO14874 412 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 GALR3O60755 368 aaPredicted RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 DNAJB6O75190 326 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 SLC35G6P0C7Q6 338 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 GLI4P10075 376 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 COILP38432 576 aaPredicted RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 KIR2DL3P43628 341 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 NR0B1P51843 470 aaKnown RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 DGKQP52824 942 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 PPIAP62937 165 aaKnown RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 BTG2P78543 158 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 CRADDP78560 199 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 SLC25A35Q3KQZ1 300 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 TTLL9Q3SXZ7 439 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 B3GNT6Q6ZMB0 384 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 CDC20BQ86Y33 519 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 PRELID2Q8N945 189 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 MFSD9Q8NBP5 474 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 APCDD1LQ8NCL9 501 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 GOT1L1Q8NHS2 421 aaPredicted RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 CREB3L4Q8TEY5 395 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 SLC30A3Q99726 388 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 GPATCH1Q9BRR8 931 aaKnown RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 SARGQ9BW04 601 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 RBCK1Q9BYM8 510 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 FRMD8P1Q9BZ68 369 aaPredicted RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 CCDC177Q9NQR7 707 aaPredicted RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 PNPLA3Q9NST1 481 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 DEPPQ9NTK1 212 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 BFARQ9NZS9 450 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 PAK5Q9P286 719 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 VPS9D1Q9Y2B5 631 aa11.47□□□□□ -0.57
SRPRA-202ENST00000527817 EPN1Q9Y6I3 576 aaPredicted RBP11.47□□□□□ -0.57
SRPRA-202ENST00000527817 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.57
SRPRA-202ENST00000527817 RTTNQ86VV8 2226 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 A0A0G2JNJ9 132 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 A0A1B0GVC2 190 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 TCRBV16S1A1N1A0A5B0 115 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 GRID2IPA4D2P6 1211 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 ZNF860A6NHJ4 632 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 FIGNL2A6NMB9 653 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 SYT5O00445 386 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 LIASO43766 372 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 B4GALT2O60909 372 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 ITGA10O75578 1167 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 IGHG3P01860 377 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 TUBB4AP04350 444 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 ENO3P13929 434 aaPredicted RBP11.46□□□□□ -0.57
SRPRA-202ENST00000527817 ETS1P14921 441 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 ALOX12P18054 663 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 OGNP20774 298 aaKnown RBP11.46□□□□□ -0.57
SRPRA-202ENST00000527817 GRK3P35626 688 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 CLCN2P51788 898 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 GPR85P60893 370 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 SKP1P63208 163 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 PWP1Q13610 501 aa11.46□□□□□ -0.57
SRPRA-202ENST00000527817 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms