RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NANOGP8Q6NSW7 305 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 MMABQ96EY8 250 aaPredicted RBP14.51□□□□□ -0.09
USP47-207ENST00000527733 NANOGQ9H9S0 305 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 SLC24A3Q9HC58 644 aa14.51□□□□□ -0.09
USP47-207ENST00000527733 C17orf113A0A1B0GUU1 675 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 FEZF1A0PJY2 475 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 ENO4A6NNW6 628 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 BCHEP06276 602 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 MMP2P08253 660 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 LASP1Q14847 261 aaKnown RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 POMZP3Q6PJE2 187 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 TRAF7Q6Q0C0 670 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 FIGLAQ6QHK4 219 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 BLOC1S3Q6QNY0 202 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 CSNK1A1LQ8N752 337 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 PDPRQ8NCN5 879 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 OR7G3Q8NG95 312 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 FAM110BQ8TC76 370 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 ZNF483Q8TF39 744 aaPredicted RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 OR5P2Q8WZ92 322 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 MYEOVQ96EZ4 313 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 ART5Q96L15 291 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 GPATCH1Q9BRR8 931 aaKnown RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 PELI2Q9HAT8 420 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 WBP11Q9Y2W2 641 aaKnown RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 ENTPD2Q9Y5L3 495 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 PLXNB2O15031 1838 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 BCKDKO14874 412 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 ATP5A1P25705 553 aaKnown RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 SLAMF1Q13291 335 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 NFATC4Q14934 902 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 THAP5Q7Z6K1 395 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 SCAIQ8N9R8 606 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 A0A096LPI6 279 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 CREG1O75629 220 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 BCAS2O75934 225 aaPredicted RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 PDHA2P29803 388 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 RPL5P46777 297 aaKnown RBP14.5□□□□□ -0.09
USP47-207ENST00000527733 NRG3P56975 720 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 Q9N2J8 555 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 PCDH10Q9P2E7 1040 aa14.5□□□□□ -0.09
USP47-207ENST00000527733 COL11A1P12107 1806 aaPredicted RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 BTN3A3O00478 584 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 SDC3O75056 442 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 TBX10O75333 385 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 OPN1SWP03999 348 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 GPR68Q15743 365 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 DUS1LQ6P1R4 473 aaKnown RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 USP53Q70EK8 1073 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 BHLHA9Q7RTU4 235 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 OR5K1Q8NHB7 308 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 WDR60Q8WVS4 1066 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 SIPA1L1O43166 1804 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 KIR2DS5A0A0G2JLQ3 304 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 A0A0G2JNG1 304 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 PRSS38A1L453 326 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 MCIDASD6RGH6 385 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 KIR2DS3K7RE56 304 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 RTCAO00442 366 aaKnown RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 PGM3O95394 542 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 NELFEP18615 380 aaKnown RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 KIR2DS5Q14953 304 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 CATSPEREQ5SY80 951 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 ADIPOR2Q86V24 386 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 PLXDC1Q8IUK5 500 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 OR8J3Q8NGG0 315 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 FAM81AQ8TBF8 368 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 GEMIN6Q8WXD5 167 aaKnown RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 C5orf34Q96MH7 638 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 HSPA12BQ96MM6 686 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 SORT1Q99523 831 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 VN1R3Q9BXE9 311 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 ADAMTS6Q9UKP5 1117 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 PRRT4C9JH25 899 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 I6L893 689 aaPredicted RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 CDK9P50750 372 aaKnown RBP14.49□□□□□ -0.09
USP47-207ENST00000527733 YPEL5P62699 121 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 CDKL1Q00532 357 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 KLHL12Q53G59 568 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 ADI1Q9BV57 179 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 C1orf226A1L170 272 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 OR6B1O95007 311 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 XKP51811 444 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 CTBSQ01459 385 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 LCTLQ6UWM7 567 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 TMEM126BQ8IUX1 230 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 CCDC116Q8IYX3 515 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 NFKBIDQ8NI38 313 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 FAM192AQ9GZU8 254 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 COQ10BQ9H8M1 238 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 RASSF1Q9NS23 344 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 NUP205Q92621 2012 aa14.49□□□□□ -0.09
USP47-207ENST00000527733 PROS1P07225 676 aa14.48□□□□□ -0.09
USP47-207ENST00000527733 AK4P27144 223 aaPredicted RBP14.48□□□□□ -0.09
USP47-207ENST00000527733 CD38P28907 300 aa14.48□□□□□ -0.09
USP47-207ENST00000527733 C5orf22Q49AR2 442 aa14.48□□□□□ -0.09
USP47-207ENST00000527733 KHDRBS2Q5VWX1 349 aaKnown RBP14.48□□□□□ -0.09
USP47-207ENST00000527733 SLC29A4Q7RTT9 530 aa14.48□□□□□ -0.09
USP47-207ENST00000527733 OR7A2PQ8NGA2 310 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms