RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CARNMT1Q8N4J0 409 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 OR2L5Q8NG80 312 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 CFAP61Q8NHU2 1237 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 PTERQ96BW5 349 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 ANKRD27Q96NW4 1050 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 PSMD1Q99460 953 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 ACTL8Q9H568 366 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 TXNDC16Q9P2K2 825 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 ITGA11Q9UKX5 1188 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 ZFP37Q9Y6Q3 630 aaPredicted RBP1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 HIVEP2P31629 2446 aa1.66□□□□□ -2.14
ECHDC1-219ENST00000526299 TRAV24A0A0B4J272 114 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 TRBV5-4A0A0C4DH59 114 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 PGPEP1LA6NFU8 196 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 TCP10L2B9ZVM9 353 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 LRRTM2O43300 516 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 TSC22D2O75157 780 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 PTP4A3O75365 173 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 SERPING1P05155 500 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 CSN3P07498 182 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 VDRP11473 427 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 CD22P20273 847 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 RPL9P32969 192 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 FEN1P39748 380 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 MDH2P40926 338 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 STAT2P52630 851 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 ARF3P61204 181 aaPredicted RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 POLR2LP62875 67 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 ARF1P84077 181 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 TEFQ10587 303 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 KIAA0040Q15053 153 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 MMS22LQ6ZRQ5 1243 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 Q71RC1 249 aaPredicted RBP1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 PGM2Q96G03 612 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 FEVQ99581 238 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 HSD17B14Q9BPX1 270 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 UNC45AQ9H3U1 944 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 PGAP2Q9UHJ9 254 aa1.65□□□□□ -2.15
ECHDC1-219ENST00000526299 CDC42BPBQ9Y5S2 1711 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 A8MU76 341 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 PANO1I0J062 215 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 MAGEB4O15481 346 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 STAM2O75886 525 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 P0C879 139 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 EPCAMP16422 314 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 GDF1P27539 372 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 WNT4P56705 351 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 CLDN15P56746 228 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 PCLAFQ15004 111 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 ABRAXAS2Q15018 415 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 ECSCRQ19T08 205 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 VWA2Q5GFL6 755 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 PLEKHS1Q5SXH7 462 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 C6orf163Q5TEZ5 329 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 RFWD3Q6PCD5 774 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 CCDC60Q8IWA6 550 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 DND1Q8IYX4 353 aaKnown RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 NME8Q8N427 588 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 APPL2Q8NEU8 664 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 ZNF564Q8TBZ8 553 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 AFAP1L1Q8TED9 768 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 NSUN4Q96CB9 384 aaKnown RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 ZBED6CLQ96FA7 236 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 DNAJC4Q9NNZ3 241 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 GDE1Q9NZC3 331 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 ZNF319Q9P2F9 582 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 CRNNQ9UBG3 495 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 KLK12Q9UKR0 248 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 MTF2Q9Y483 593 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 COLEC10Q9Y6Z7 277 aa1.64□□□□□ -2.15
ECHDC1-219ENST00000526299 LOC390937A0A1W2PQ73 354 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 TRIM77I1YAP6 450 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 EIF3JO75822 258 aaKnown RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 ACTL6AO96019 429 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 YES1P07947 543 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 SAT1P21673 171 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 DUTP33316 252 aaKnown RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 ASCL1P50553 236 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 ILF2Q12905 390 aaKnown RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 CCL14Q16627 93 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 ZNF658BQ4V348 819 aaPredicted RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 XKR4Q5GH76 650 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 GORABQ5T7V8 394 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 Q6ZVQ6 151 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 FBXO16Q8IX29 292 aaPredicted RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 OR6F1Q8NGZ6 308 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 ZNF622Q969S3 477 aaKnown RBP eCLIP1.63□□□□□ -2.151e-7■□□□□ 9.8
ECHDC1-219ENST00000526299 ST6GALNAC6Q969X2 333 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 CPNE1Q99829 537 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 PAXXQ9BUH6 204 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 PLEKHA3Q9HB20 300 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 HAO2Q9NYQ3 351 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 PKD2L2Q9NZM6 624 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 DDX25Q9UHL0 483 aaKnown RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 MOKQ9UQ07 419 aa1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 NIP7Q9Y221 180 aaKnown RBP eCLIP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 ARID4BQ4LE39 1312 aaPredicted RBP1.63□□□□□ -2.15
ECHDC1-219ENST00000526299 A0A1W2PPM1 405 aa1.62□□□□□ -2.15
ECHDC1-219ENST00000526299 PINLYPA6NC86 204 aa1.62□□□□□ -2.15
ECHDC1-219ENST00000526299 ZNF487B1APH4 448 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms