RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 THAP10Q9P2Z0 257 aaPredicted RBP3.59□□□□□ -1.83
CD44-215ENST00000525241 DNAJB9Q9UBS3 223 aa3.59□□□□□ -1.83
CD44-215ENST00000525241 MUTYHQ9UIF7 546 aa3.59□□□□□ -1.83
CD44-215ENST00000525241 KLK13Q9UKR3 277 aa3.59□□□□□ -1.83
CD44-215ENST00000525241 HBS1LQ9Y450 684 aaKnown RBP3.59□□□□□ -1.83
CD44-215ENST00000525241 CACNA1FO60840 1977 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 IGHV3-20A0A0C4DH32 117 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 A0A1W2PPR1 153 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 TFECO14948 347 aaPredicted RBP3.58□□□□□ -1.84
CD44-215ENST00000525241 PGRMC2O15173 223 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 KRT3P12035 628 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 GOT1P17174 413 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 OR3A3P47888 321 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 KCNJ1P48048 391 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 TAF6P49848 677 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 BTG1P62324 171 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 ROR1Q01973 937 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 PTK6Q13882 451 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 GRB14Q14449 540 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 SPANXN4Q5MJ08 99 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 MSANTD1Q6ZTZ1 278 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 TRMT11Q7Z4G4 463 aaKnown RBP3.58□□□□□ -1.84
CD44-215ENST00000525241 ANKRD46Q86W74 232 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 TDHQ8IZJ6 230 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 OR8H3Q8N146 312 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 CCDC185Q8N715 623 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 NKAIN3Q8N8D7 197 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 AMER3Q8N944 861 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 NHLRC2Q8NBF2 726 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 MIPOL1Q8TD10 442 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 SAP25Q8TEE9 199 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 LRRC15Q8TF66 581 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 PARK7Q99497 189 aaKnown RBP3.58□□□□□ -1.84
CD44-215ENST00000525241 GPATCH1Q9BRR8 931 aaKnown RBP3.58□□□□□ -1.84
CD44-215ENST00000525241 MLPHQ9BV36 600 aaPredicted RBP3.58□□□□□ -1.84
CD44-215ENST00000525241 BAIAP2L1Q9UHR4 511 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 GTF3C4Q9UKN8 822 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 SATB2Q9UPW6 733 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 MOB4Q9Y3A3 225 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 PCDHGA1Q9Y5H4 931 aa3.58□□□□□ -1.84
CD44-215ENST00000525241 IGHV4-30-2A0A087WSY4 118 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 ILVBLA1L0T0 632 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 ASB14A6NK59 587 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 SHISA7A6NL88 538 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 ACSL4O60488 711 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 SNAP91O60641 907 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 LRCH4O75427 683 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 C4BPBP20851 252 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 PIK3R1P27986 724 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 GPR183P32249 361 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 SOAT1P35610 550 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 PAX8Q06710 450 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 PPA1Q15181 289 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 MACC1Q6ZN28 852 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 GPRIN3Q6ZVF9 776 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 KRT77Q7Z794 578 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 DND1Q8IYX4 353 aaKnown RBP3.57□□□□□ -1.84
CD44-215ENST00000525241 GOT1L1Q8NHS2 421 aaPredicted RBP3.57□□□□□ -1.84
CD44-215ENST00000525241 RPLP0P6Q8NHW5 317 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 CD99L2Q8TCZ2 262 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 SLC45A3Q96JT2 553 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 CCDC114Q96M63 670 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 PRMT1Q99873 361 aaKnown RBP3.57□□□□□ -1.84
CD44-215ENST00000525241 ADPGKQ9BRR6 497 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 ATG101Q9BSB4 218 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 UBXN6Q9BZV1 441 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 LSG1Q9H089 658 aaKnown RBP3.57□□□□□ -1.84
CD44-215ENST00000525241 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
CD44-215ENST00000525241 SH3GLB2Q9NR46 395 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 SLCO1C1Q9NYB5 712 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 NLGN3Q9NZ94 848 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 CDH7Q9ULB5 785 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 PLCL2Q9UPR0 1127 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 NCKAP1Q9Y2A7 1128 aa3.57□□□□□ -1.84
CD44-215ENST00000525241 MYH14Q7Z406 1995 aaKnown RBP3.56□□□□□ -1.84
CD44-215ENST00000525241 RNF123Q5XPI4 1314 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 IGKV3D-20A0A0C4DH25 116 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 KBTBD13C9JR72 458 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 CTDSPLO15194 276 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 SUPT20HL2P0C7V6 817 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 AOC1P19801 751 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 SHC1P29353 583 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 SRD5A2P31213 254 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 NPBWR1P48145 328 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 RAPSNQ13702 412 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 NHSL2Q5HYW2 709 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 HECTD3Q5T447 861 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 CASC4Q6P4E1 433 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 NHLRC1Q6VVB1 395 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 C15orf52Q6ZUT6 534 aaKnown RBP3.56□□□□□ -1.84
CD44-215ENST00000525241 KLHL7Q8IXQ5 586 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 Q8N377 158 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 FAM222BQ8WU58 562 aa3.56□□□□□ -1.84
CD44-215ENST00000525241 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
CD44-215ENST00000525241 ANKRD9Q96BM1 317 aaPredicted RBP3.56□□□□□ -1.84
CD44-215ENST00000525241 PAPOLGQ9BWT3 736 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms