RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CEP128Q6ZU80 1094 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 RELL1Q8IUW5 271 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 KBTBD2Q8IY47 623 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 TRPV3Q8NET8 790 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 STAG3L4Q8TBR4 150 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 CREB3L4Q8TEY5 395 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 METTL21AQ8WXB1 218 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 PNPLA2Q96AD5 504 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 AGAP4Q96P64 663 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 SLC6A16Q9GZN6 736 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 AICDAQ9GZX7 198 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 ACSS3Q9H6R3 686 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 CNOT10Q9H9A5 744 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 SNX15Q9NRS6 342 aa12.13□□□□□ -0.47
TRAPPC4-205ENST00000525079 DOCK10Q96BY6 2186 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 SCN2AQ99250 2005 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 A0A087X1B8 175 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 LOC102723996A0A087X1L8 192 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 A0A096LPK6 155 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 POC1B-GALNT4F8VUJ3 575 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 PRR35P0CG20 571 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 DOC2AQ14183 400 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 INPP5JQ15735 1006 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 XKR6Q5GH73 641 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 CDKL4Q5MAI5 379 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 ADNP2Q6IQ32 1131 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 TMIGD1Q6UXZ0 262 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 ABHD13Q7L211 337 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 CENPLQ8N0S6 344 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 SIRT6Q8N6T7 355 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 CEP112Q8N8E3 955 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 PDPRQ8NCN5 879 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 BRIX1Q8TDN6 353 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 TM9SF4Q92544 642 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 ATOH8Q96SQ7 321 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 CD244Q9BZW8 370 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 ZNF700Q9H0M5 742 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 VPS11Q9H270 941 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 RHBGQ9H310 441 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 RIC8BQ9NVN3 520 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 GPRC5BQ9NZH0 403 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 NUDT4Q9NZJ9 180 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 PTGFRNQ9P2B2 879 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 B3GNT3Q9Y2A9 372 aa12.12□□□□□ -0.47
TRAPPC4-205ENST00000525079 URADA6NGE7 173 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 FAM227AF5H4B4 570 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 B4GALT2O60909 372 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 KERAO60938 352 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 WFS1O76024 890 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 SERPINA7P05543 415 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 UQCRHP07919 91 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 SERPINA6P08185 405 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 SMIM10L1P0DMW3 83 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 ITGAMP11215 1152 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 EPORP19235 508 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CD22P20273 847 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 TYK2P29597 1187 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 HNRNPH1P31943 449 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 UQCRFS1P47985 274 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 BTN3A2P78410 334 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CHIT1Q13231 466 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 PDK4Q16654 411 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 B3GNTL1Q67FW5 361 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 ISLR2Q6UXK2 745 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CPEB2Q7Z5Q1 589 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CUZD1Q86UP6 607 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 ATCAYQ86WG3 371 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 LRRN4CLQ8ND94 238 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 SLC44A1Q8WWI5 657 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 PSMF1Q92530 271 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 TSLPQ969D9 159 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 SMIM10Q96HG1 83 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 CNDP1Q96KN2 507 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 IMMP1LQ96LU5 166 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 MAGEB10Q96LZ2 347 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 LANCL2Q9NS86 450 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 PLA2G3Q9NZ20 509 aa12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 ZNF490Q9ULM2 529 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-205ENST00000525079 A0A1W2PQ72 361 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 ANKDD1BA6NHY2 528 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 LRRC14BA6NHZ5 514 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 VPS4BO75351 444 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 KLHL2O95198 593 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms