RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 TAS2R39P59534 338 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 RAB8AP61006 207 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 AP2B1P63010 937 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 BTG2P78543 158 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 MRPS25P82663 173 aaKnown RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 DR1Q01658 176 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 HERC3Q15034 1050 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 NSDHLQ15738 373 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 EXT1Q16394 746 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 ZNF468Q5VIY5 522 aaPredicted RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 THOC6Q86W42 341 aaKnown RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 ZC3HC1Q86WB0 502 aaKnown RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 CEP97Q8IW35 865 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 PDIK1LQ8N165 341 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 FBXO36Q8NEA4 188 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 RELTQ969Z4 430 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 PDLIM5Q96HC4 596 aaKnown RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 OR1F2PQ96R84 312 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 SLC6A16Q9GZN6 736 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 TSPAN10Q9H1Z9 355 aaPredicted RBP11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 MMP25Q9NPA2 562 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 KLHL1Q9NR64 748 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 SEC14L3Q9UDX4 400 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 SH3BGRL2Q9UJC5 107 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 ZFP69BQ9UJL9 534 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
CLNS1A-202ENST00000525064 FBN2P35556 2912 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 PKDREJQ9NTG1 2253 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 TRGV8A0A0C4DH27 118 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 A0A1B0GUH1 482 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ARHGAP10A1A4S6 786 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 PABPN1LA6NDY0 278 aaKnown RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 GABRR3A8MPY1 467 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 FAM227AF5H4B4 570 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ZNHIT1O43257 154 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ENO2P09104 434 aaPredicted RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 SMIM10L1P0DMW3 83 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 MAOAP21397 527 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 AHRP35869 848 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 RPL21P46778 160 aaKnown RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ARL4CP56559 192 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ACTN3Q08043 901 aaPredicted RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 MGAT5Q09328 741 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 PDIA2Q13087 525 aaKnown RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 PWP1Q13610 501 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 FRG1Q14331 258 aaKnown RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 CSHL1Q14406 222 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 OR1C1Q15619 314 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 MEP1AQ16819 746 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 TOR1AIP1Q5JTV8 583 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 SPINK14Q6IE38 97 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 NXPE4Q6UWF7 544 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 CAPN12Q6ZSI9 719 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 STRA8Q7Z7C7 330 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 DNAJB8Q8NHS0 232 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 CREB3L4Q8TEY5 395 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ATL1Q8WXF7 558 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 TBC1D20Q96BZ9 403 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 SCMH1Q96GD3 660 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 CCDC120Q96HB5 630 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 SMIM10Q96HG1 83 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 LPAR4Q99677 370 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 MCMBPQ9BTE3 642 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 TRIM54Q9BYV2 358 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 FAM129AQ9BZQ8 928 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 RHBGQ9H310 441 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 CDCP1Q9H5V8 836 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 PELI2Q9HAT8 420 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 TEKT2Q9UIF3 430 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 SLC22A14Q9Y267 594 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 DYRK1BQ9Y463 629 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 OARD1Q9Y530 152 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
CLNS1A-202ENST00000525064 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 A0A0G2JN53 185 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 PRSS44E7EML9 344 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 E7ESA3 106 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 NEURL1O76050 574 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 WISP3O95389 354 aaPredicted RBP11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 CRYABP02511 175 aaKnown RBP11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 IL10P22301 178 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 GMPRP36959 345 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 GDF5P43026 501 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 CA7P43166 264 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 RGS1Q08116 209 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 TSNQ15631 228 aaKnown RBP11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 FBXO48Q5FWF7 155 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 QSOX2Q6ZRP7 698 aa11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 SYDE1Q6ZW31 735 aaPredicted RBP11.08□□□□□ -0.64
CLNS1A-202ENST00000525064 ABHD13Q7L211 337 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms