RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TBC1D10CQ8IV04 446 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZNF440Q8IYI8 595 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ABCA7Q8IZY2 2146 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 LYG1Q8N1E2 194 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TMEM86AQ8N2M4 240 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZCCHC9Q8N567 271 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 NKAPQ8N5F7 415 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 TRIML1Q8N9V2 468 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 CCDC148Q8NFR7 591 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 OR4C6Q8NH72 309 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 THAP6Q8TBB0 222 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ETNPPLQ8TBG4 499 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZNF653Q96CK0 615 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZBTB10Q96DT7 871 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 TCEAL4Q96EI5 215 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 C14orf79Q96F83 325 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 LINGO1Q96FE5 620 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZNF354BQ96LW1 612 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 SCLT1Q96NL6 688 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 LRRC3BQ96PB8 259 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 BBS4Q96RK4 519 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 BARD1Q99728 777 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 TREX2Q9BQ50 279 aaPredicted RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 NEURL2Q9BR09 285 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FUCA2Q9BTY2 467 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 GTPBP2Q9BX10 602 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 TEKT3Q9BXF9 490 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 SLC2A11Q9BYW1 496 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 UBA5Q9GZZ9 404 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 C6orf50Q9HD87 102 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 BPIFA1Q9NP55 256 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 CHST11Q9NPF2 352 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZDHHC4Q9NPG8 344 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 GDF3Q9NR23 364 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 DUS2Q9NX74 493 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 ALKBH4Q9NXW9 302 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 NLGN3Q9NZ94 848 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 KCND2Q9NZV8 630 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 GCNT4Q9P109 453 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 CACNG5Q9UF02 275 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 RASAL2Q9UJF2 1139 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ISY1Q9ULR0 285 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 GINS2Q9Y248 185 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 ZNF510Q9Y2H8 683 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FAM96BQ9Y3D0 163 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 C2CD2Q9Y426 696 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 CEPT1Q9Y6K0 416 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 PKD1L1Q8TDX9 2849 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 FLNAP21333 2647 aaKnown RBP1.5□□□□□ -2.17
CD44-212ENST00000524922 SVILO95425 2214 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 KIAA1549LQ6ZVL6 1849 aa1.5□□□□□ -2.17
CD44-212ENST00000524922 MED13Q9UHV7 2174 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 EML5Q05BV3 1969 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SHROOM3Q8TF72 1996 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ABCA4P78363 2273 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 PTPRDP23468 1912 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TICRRQ7Z2Z1 1910 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SMIM28A0A1B0GU29 152 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 A0A1W2PNU3 283 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 A0A1W2PPI3 338 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 A0A1W2PR77 199 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TCRBV21S2A2A0A5A6 115 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 NEMP2A6NFY4 417 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 MEI4A8MW99 385 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SGK1O00141 431 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ADAM12O43184 909 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 IRAK2O43187 625 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZW10O43264 779 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SEC14L5O43304 696 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 EPB41L2O43491 1005 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 CIDEAO60543 219 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SORBS2O94875 1100 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 CSPG5O95196 566 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 GOSR1O95249 250 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SEC24AO95486 1093 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 LDOC1O95751 146 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 OAS1P00973 400 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 PENKP01210 267 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ZDHHC11BP0C7U3 371 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 GOLGA8HP0CJ92 632 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 HAPLN1P10915 354 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ODC1P11926 461 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 HMGA1P17096 107 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 MX1P20591 662 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZNF10P21506 573 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 UGT1A1P22309 533 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 GABRR2P28476 465 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 YWHABP31946 246 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 MAN1A1P33908 653 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 AHRP35869 848 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 UBA7P41226 1012 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 GPD2P43304 727 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TERF1P54274 439 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SNAP25P60880 206 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 CSNK2A1P68400 391 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ART3Q13508 389 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 NAE1Q13564 534 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TRA2AQ13595 282 aaKnown RBP eCLIP1.49□□□□□ -2.17
CD44-212ENST00000524922 DRAP1Q14919 205 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 KIR2DS3Q14952 304 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms