RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PRCP	P42785	496 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CLCN5	P51795	746 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	HNRNPF	P52597	415 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	VCP	P55072	806 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	KRTAP10-3	P60369	221 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	RPS13	P62277	151 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	FKBP1A	P62942	108 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	SPIB	Q01892	262 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	TNFRSF17	Q02223	184 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ABR	Q12979	859 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ZBTB17	Q13105	803 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PDZK1IP1	Q13113	114 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PLD1	Q13393	1074 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	NAE1	Q13564	534 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PNLIPRP3	Q17RR3	467 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	LDLRAP1	Q5SW96	308 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CYB5D1	Q6P9G0	228 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	C4orf19	Q8IY42	314 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	BBS5	Q8N3I7	341 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ARL14	Q8N4G2	192 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	GJC3	Q8NFK1	279 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ATOH1	Q92858	354 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	BAD	Q92934	168 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ITFG2	Q969R8	447 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	AZIN2	Q96A70	460 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	AGAP3	Q96P47	875 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PSKH2	Q96QS6	385 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ACOX2	Q99424	681 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF559	Q9BR84	538 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	DDX47	Q9H0S4	455 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	WNT5B	Q9H1J7	359 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	WDR6	Q9NNW5	1121 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PANK4	Q9NVE7	773 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	IPO11	Q9UI26	975 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	TEKT2	Q9UIF3	430 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	AMFR	Q9UKV5	643 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PSME2	Q9UL46	239 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	PLA2G4C	Q9UP65	541 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	DDX49	Q9Y6V7	483 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	OTOF	Q9HC10	1997 aa		4.07	□□□□□ -1.76
PCM1-223	ENST00000524356	COL1A1	P02452	1464 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	DLG5	Q8TDM6	1919 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM8B	A6NDV4	472 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM247	A6NEH6	219 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	DUXA	A6NLW8	204 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ACOT8	O14734	319 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	HS3ST1	O14792	307 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	BUB1	O43683	1085 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	SPOP	O43791	374 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	GCAT	O75600	419 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	RNF8	O76064	485 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	LIPF	P07098	398 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	FGF4	P08620	206 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	RAB40AL	P0C0E4	278 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	IQCF3	P0C7M6	154 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PLA2G4B	P0C869	781 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	POLR2M	P0CAP2	368 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF853	P0CG23	659 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PCNA	P12004	261 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	APEH	P13798	732 aa	Known RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CDH3	P22223	829 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PKLR	P30613	574 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	GABRA5	P31644	462 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	KCNJ4	P48050	445 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CENPA	P49450	140 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CYP2J2	P51589	502 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	HAND2	P61296	217 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	POLR2L	P62875	67 aa	Known RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	GCKR	Q14397	625 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ZMYND11	Q15326	602 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	C2orf68	Q2NKX9	166 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CCDC57	Q2TAC2	916 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	SYTL3	Q4VX76	610 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ESCO2	Q56NI9	601 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	TDRD12	Q587J7	1177 aa	Known RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	LRRC73	Q5JTD7	316 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CFAP157	Q5JU67	520 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	GCNT6	Q5T4J0	391 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	AADACL4	Q5VUY2	407 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PRAMEF7	Q5VXH5	474 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CDC42EP5	Q6NZY7	148 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	METAP1D	Q6UB28	335 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CLEC2A	Q6UVW9	174 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ENPP7	Q6UWV6	458 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	DLEU7	Q6UYE1	221 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PQLC2	Q6ZP29	291 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	LINC01465	Q8N7H1	131 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	NIPA2	Q8N8Q9	360 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM184A	Q8NB25	1140 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	TRPV1	Q8NER1	839 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	STEAP2	Q8NFT2	490 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	TRIM58	Q8NG06	486 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	BBS10	Q8TAM1	723 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	GPT2	Q8TD30	523 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC20A1	Q8WUM9	679 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	FBXL8	Q96CD0	374 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms