RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 GOLGA8MH3BSY2 632 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 OR1F1O43749 312 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 IL10P22301 178 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 BTG2P78543 158 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 GPS1Q13098 491 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 HERC3Q15034 1050 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 CAND1Q86VP6 1230 aaKnown RBP24.29■■□□□ 1.48
PVT1-219ENST00000523427 ZNF740Q8NDX6 193 aa24.29■■□□□ 1.48
PVT1-219ENST00000523427 C20orf96Q9NUD7 363 aaPredicted RBP24.29■■□□□ 1.48
PVT1-219ENST00000523427 NKX2-6A6NCS4 301 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 HS6ST1O60243 411 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 PDE9AO76083 593 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 HAUS5O94927 633 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 MLF1P58340 268 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 HYAL2Q12891 473 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 PALM2Q8IXS6 379 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 FAM57AQ8TBR7 257 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 EEF1AKMT1Q8WVE0 214 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 NDNQ99608 321 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 UCK2Q9BZX2 261 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 RBSNQ9H1K0 784 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 RHBGQ9H310 441 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 IGSF5Q9NSI5 407 aa24.28■■□□□ 1.48
PVT1-219ENST00000523427 TRMT6Q9UJA5 497 aaKnown RBP24.28■■□□□ 1.48
PVT1-219ENST00000523427 FAM237BA0A1B0GVD1 139 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 SDR42E2A6NKP2 422 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 GALR3O60755 368 aaPredicted RBP24.27■■□□□ 1.48
PVT1-219ENST00000523427 ALOX12P18054 663 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 JAK1P23458 1154 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 HNF4AP41235 474 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 SULF2Q8IWU5 870 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 MARVELD2Q8N4S9 558 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 SPC24Q8NBT2 197 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 PYCR2Q96C36 320 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 DEFB126Q9BYW3 111 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 HRH3Q9Y5N1 445 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 MAD1L1Q9Y6D9 718 aa24.27■■□□□ 1.48
PVT1-219ENST00000523427 CEP104O60308 925 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 PRMT3O60678 531 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 ZNF888P0CJ79 500 aaPredicted RBP24.26■■□□□ 1.47
PVT1-219ENST00000523427 MAOAP21397 527 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 HLCSP50747 726 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 GPR85P60893 370 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 ACBD4Q8NC06 268 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 AARSD1Q9BTE6 412 aaKnown RBP24.26■■□□□ 1.47
PVT1-219ENST00000523427 PARVBQ9HBI1 364 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 FBXO5Q9UKT4 447 aa24.26■■□□□ 1.47
PVT1-219ENST00000523427 KLF13Q9Y2Y9 288 aaPredicted RBP24.26■■□□□ 1.47
PVT1-219ENST00000523427 ZCWPW2A0A1B0GU75 182 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 FCHO1O14526 889 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 NADKO95544 446 aaPredicted RBP24.25■■□□□ 1.47
PVT1-219ENST00000523427 NPPBP16860 134 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 CCR8P51685 355 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 ART1P52961 327 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 RAB8AP61006 207 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 LCTLQ6UWM7 567 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 TMEM200AQ86VY9 491 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 CCDC71Q8IV32 467 aaPredicted RBP24.25■■□□□ 1.47
PVT1-219ENST00000523427 AFAP1L2Q8N4X5 818 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 MAIP1Q8WWC4 291 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 FAM129AQ9BZQ8 928 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 RNF6Q9Y252 685 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 ZKSCAN5Q9Y2L8 839 aa24.25■■□□□ 1.47
PVT1-219ENST00000523427 INTS1Q8N201 2190 aaKnown RBP24.25■■□□□ 1.47
PVT1-219ENST00000523427 MAGEB16A2A368 324 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 USP27XA6NNY8 438 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 KLRC4-KLRK1H3BQV0 150 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 PEX1O43933 1283 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 C8GP07360 202 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 HIST1H2AGP0C0S8 130 aaPredicted RBP24.24■■□□□ 1.47
PVT1-219ENST00000523427 TFEBP19484 476 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 HIST1H2ADP20671 130 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 RGS4P49798 205 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 PHKG1Q16816 387 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 HSP90AA5PQ58FG0 334 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 MYO1HQ8N1T3 1032 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 RPRMLQ8N4K4 120 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 POGLUT1Q8NBL1 392 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 HIST1H2AHQ96KK5 128 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 HIST1H2AJQ99878 128 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 H2AFJQ9BTM1 129 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 SGPP1Q9BX95 441 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 DEFB127Q9H1M4 99 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 NPDC1Q9NQX5 325 aaPredicted RBP24.24■■□□□ 1.47
PVT1-219ENST00000523427 IARS2Q9NSE4 1012 aaKnown RBP24.24■■□□□ 1.47
PVT1-219ENST00000523427 FBXW2Q9UKT8 454 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 COMMD10Q9Y6G5 202 aa24.24■■□□□ 1.47
PVT1-219ENST00000523427 TRBV11-1A0A0K0K1C0 115 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 SAGE2PA6NJ88 616 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 KRT14P02533 472 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 CCND1P24385 295 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 CXCR5P32302 372 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 SKP1P63208 163 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 RGS1Q08116 209 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 CMPK2Q5EBM0 449 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 CATSPEREQ5SY80 951 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 TMEM211Q6ICI0 200 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 TMEM156Q8N614 296 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 ASB5Q8WWX0 329 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 NRGNQ92686 78 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms