RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 OR5T3Q8NGG3 340 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 MAGEC3Q8TD91 643 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 SKA2Q8WVK7 121 aaPredicted RBP12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 CAPZA3Q96KX2 299 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 PACSIN1Q9BY11 444 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 DDX56Q9NY93 547 aaKnown RBP12.85□□□□□ -0.35
NKX3-1-202ENST00000523261 TRGV5A0A0B4J1U4 118 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 MROH6A6NGR9 719 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ZNF860A6NHJ4 632 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 A8MVJ9 347 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 KIF5CO60282 957 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 CCNDBP1O95273 360 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 SIX3O95343 332 aaPredicted RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 H2AFZP0C0S5 128 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 FPR1P21462 350 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 PTH2RP49190 550 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 MEF2AQ02078 507 aaPredicted RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 FOXO1Q12778 655 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 TSTA3Q13630 321 aaPredicted RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ACKR1Q16570 336 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 HYAL4Q2M3T9 481 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 C10orf62Q5T681 223 aaPredicted RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 KCTD11Q693B1 232 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 H2AFVQ71UI9 128 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 GPALPP1Q8IXQ4 340 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 KLHDC8BQ8IXV7 354 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 OR9A1PQ8NGU1 263 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 GSDMBQ8TAX9 411 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ISL2Q96A47 359 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 TBC1D20Q96BZ9 403 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 TTC1Q99614 292 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 FAM173AQ9BQD7 235 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 JKAMPQ9P055 326 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 ZNF223Q9UK11 482 aaPredicted RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 EIF3LQ9Y262 564 aaKnown RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 YARS2Q9Y2Z4 477 aaKnown RBP12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
NKX3-1-202ENST00000523261 USF3Q68DE3 2245 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 SH3D21A4FU49 640 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 OR6B1O95007 311 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 EPPINO95925 133 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 SERPING1P05155 500 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 TIMP3P35625 211 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 CLCN2P51788 898 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 ABATP80404 500 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 SEMA3AQ14563 771 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 ACSF3Q4G176 576 aaPredicted RBP12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 IL20RBQ6UXL0 311 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 KCT2Q8NC54 265 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 CTNNBL1Q8WYA6 563 aaPredicted RBP12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 FOPNLQ96NB1 174 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 EPB41L4BQ9H329 900 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 EXO5Q9H790 373 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
NKX3-1-202ENST00000523261 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 TCRBV16S1A1N1A0A5B0 115 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 A8MUA0 341 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 EEF1E1-BLOC1S5C9J1V9 151 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 H7BY64 318 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 H7C0C1 242 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 EEF1E1O43324 174 aaKnown RBP12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 B4GALT2O60909 372 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 SOX30O94993 753 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 GOT2P00505 430 aaKnown RBP12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 TNNT1P13805 278 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 CNR1P21554 472 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 JAK1P23458 1154 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 ATP5OP48047 213 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 BTG2P78543 158 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 TNK1Q13470 666 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 ARHGAP19Q14CB8 494 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 CHRFAM7AQ494W8 412 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 XKR6Q5GH73 641 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 QSOX2Q6ZRP7 698 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 LACC1Q8IV20 430 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 CCDC50Q8IVM0 306 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 MAPK1IP1LQ8NDC0 245 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 B3GNT7Q8NFL0 401 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 OR13J1Q8NGT2 312 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 TM4SF19Q96DZ7 209 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 PRAP1Q96NZ9 151 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 EBNA1BP2Q99848 306 aaKnown RBP12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 WDR83Q9BRX9 315 aaKnown RBP12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 AARSD1Q9BTE6 412 aaKnown RBP12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 C19orf24Q9BVV8 132 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 PIH1D1Q9NWS0 290 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms