RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PIP5K1BO14986 540 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 NDUFS4O43181 175 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 RAD1O60671 282 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 SRPX2O60687 465 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 ULK1O75385 1050 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 SKAP2O75563 359 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 CLEC3AO75596 197 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 CHEK2O96017 543 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 EIF2S1P05198 315 aaKnown RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 SERPIND1P05546 499 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 ZNF28P17035 718 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 GSTM2P28161 218 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 SERPINB1P30740 379 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 RPS13P62277 151 aaKnown RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 CXADRP78310 365 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 TLE3Q04726 772 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 BTKQ06187 659 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 HYAL2Q12891 473 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 COL9A2Q14055 689 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 IL11RAQ14626 422 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 PDCD2Q16342 344 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 WASHC2DQ5SRD0 308 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 CYB5D1Q6P9G0 228 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 WDR75Q8IWA0 830 aaKnown RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 KIRREL3Q8IZU9 778 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 AFAP1L2Q8N4X5 818 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 CSNK1A1LQ8N752 337 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 TRPV3Q8NET8 790 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 OR1L3Q8NH93 324 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 PIWIL2Q8TC59 973 aaKnown RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 NT5CQ8TCD5 201 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 CCT6BQ92526 530 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 RERGQ96A58 199 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 ZNF501Q96CX3 271 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 SEC16BQ96JE7 1060 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 FAR2Q96K12 515 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 ZPBPQ9BS86 351 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 MS4A8Q9BY19 250 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 DPH1Q9BZG8 443 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 B3GNT4Q9C0J1 378 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 AICDAQ9GZX7 198 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 SPRTNQ9H040 489 aaPredicted RBP11.36□□□□□ -0.59
PVT1-215ENST00000522963 CPNE5Q9HCH3 593 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 STARD5Q9NSY2 213 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 FGFR1OP2Q9NVK5 253 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 ADGRE2Q9UHX3 823 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 ADAM21Q9UKJ8 722 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 PKD1L2Q7Z442 2459 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 H3BMH7 237 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 ZNF195O14628 629 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 HDAC3O15379 428 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 SH3BGRLO75368 114 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 TIAF1O95411 115 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 ETHE1O95571 254 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 TGFB1P01137 390 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 NTRK1P04629 796 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 SERPINA6P08185 405 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 LINC00032P0C843 101 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 SEC24CP53992 1094 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 SNRPNP63162 240 aaKnown RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 PHEXP78562 749 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 ZNF33BQ06732 778 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 RGS1Q08116 209 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 PWP1Q13610 501 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 HKDC1Q2TB90 917 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 PRTGQ2VWP7 1150 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 C10orf62Q5T681 223 aaPredicted RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 ARHGAP40Q5TG30 622 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 PRAMEF17Q5VTA0 474 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 CGB2Q6NT52 195 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 PWWP2BQ6NUJ5 590 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 CCDC81Q6ZN84 652 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 RNF165Q6ZSG1 346 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 Q6ZSR9 355 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 TRIM46Q7Z4K8 759 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 MTERF4Q7Z6M4 381 aaKnown RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 DDIASQ8IXT1 998 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 NLGN4XQ8N0W4 816 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 KCT2Q8NC54 265 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 CAMKVQ8NCB2 501 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 GALNT6Q8NCL4 622 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 NLGN4YQ8NFZ3 816 aaPredicted RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 THOC1Q96FV9 657 aaKnown RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 CHMP6Q96FZ7 201 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 C3orf30Q96M34 536 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 CCNL2Q96S94 520 aaPredicted RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 NUF2Q9BZD4 464 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 ACPTQ9BZG2 426 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 SLC7A5P2Q9GIP4 190 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 OR51B5Q9H339 312 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 KLHL31Q9H511 634 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 ENAMQ9NRM1 1142 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 PSD3Q9NYI0 1048 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 ACSL6Q9UKU0 697 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms