RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 RGS1Q08116 209 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 TCTN3Q6NUS6 607 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 ASB18Q6ZVZ8 466 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 RPS27LQ71UM5 84 aaKnown RBP16.88■□□□□ 0.29
CLK4-211ENST00000522556 TAOK1Q7L7X3 1001 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 CCDC91Q7Z6B0 441 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 TEX9Q8N6V9 391 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 MZB1Q8WU39 189 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 CCT6BQ92526 530 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 WDR34Q96EX3 536 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 SCYL1Q96KG9 808 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 TGIF2Q9GZN2 237 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 SEMA3GQ9NS98 782 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 C14orf105Q9NVL8 296 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 COPG2Q9UBF2 871 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 OPTCQ9UBM4 332 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 TBK1Q9UHD2 729 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 MKL2Q9ULH7 1088 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 IGHV3-20A0A0C4DH32 117 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 GOLGA8RI6L899 631 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 K7EPI3 171 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 SH3BGRLO75368 114 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 SMIM10L1P0DMW3 83 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 SLCO1A2P46721 670 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 CD97P48960 835 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 RRADP55042 308 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 IRF8Q02556 426 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 NAA30Q147X3 362 aaPredicted RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 TUBB8Q3ZCM7 444 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 PARP9Q8IXQ6 854 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 TMEM151AQ8N4L1 468 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 TBC1D19Q8N5T2 526 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 PTGR2Q8N8N7 351 aaPredicted RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 UBLCP1Q8WVY7 318 aaPredicted RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 PTCD3Q96EY7 689 aaKnown RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 SMIM10Q96HG1 83 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 NSUN5Q96P11 429 aaKnown RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 EHD1Q9H4M9 534 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 LANCL2Q9NS86 450 aa16.87■□□□□ 0.29
CLK4-211ENST00000522556 PCDHGA9Q9Y5G4 932 aaKnown RBP16.87■□□□□ 0.29
CLK4-211ENST00000522556 SMIM23A6NLE4 172 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 SYCE1LA8MT33 242 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 SUV39H1O43463 412 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 CHST10O43529 356 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 SLC28A2O43868 658 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 H2AFYO75367 372 aaKnown RBP16.86■□□□□ 0.29
CLK4-211ENST00000522556 WFS1O76024 890 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 HEXBP07686 556 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 SERPINA6P08185 405 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 ACPPP15309 386 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 CNTFP26441 200 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 PGDP52209 483 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 ALDH18A1P54886 795 aaKnown RBP16.86■□□□□ 0.29
CLK4-211ENST00000522556 E2F2Q14209 437 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 HERC3Q15034 1050 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 MINDY4Q4G0A6 757 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 NADK2Q4G0N4 442 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 MFSD4BQ5TF39 518 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 KLC3Q6P597 504 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 GOLGA7Q7Z5G4 137 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 KRT78Q8N1N4 520 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 GALNT16Q8N428 558 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 EIF1ADQ8N9N8 165 aaKnown RBP16.86■□□□□ 0.29
CLK4-211ENST00000522556 TRPV3Q8NET8 790 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 TSLPQ969D9 159 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 MS4A6EQ96DS6 147 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 PHF21BQ96EK2 531 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 FER1L6-AS2Q96M78 137 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 IP6K3Q96PC2 410 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 ZNF160Q9HCG1 818 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 GPR83Q9NYM4 423 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 LUZP4Q9P127 313 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 PSMC3IPQ9P2W1 217 aaPredicted RBP16.86■□□□□ 0.29
CLK4-211ENST00000522556 SPTA1P02549 2419 aa16.86■□□□□ 0.29
CLK4-211ENST00000522556 A0A1W2PPM1 405 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 LRIT2A6NDA9 550 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 FAM227AF5H4B4 570 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 E2F3O00716 465 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 ERI3O43414 337 aaKnown RBP16.85■□□□□ 0.29
CLK4-211ENST00000522556 EEF1DP29692 281 aaKnown RBP16.85■□□□□ 0.29
CLK4-211ENST00000522556 PCOLCEQ15113 449 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 PCBP2Q15366 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLK4-211ENST00000522556 TIFABQ6ZNK6 161 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 ZNF605Q86T29 641 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 CYP4X1Q8N118 509 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 CLEC1AQ8NC01 280 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 OR2W6PQ8NHA6 318 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 EPS8L3Q8TE67 593 aaKnown RBP16.85■□□□□ 0.29
CLK4-211ENST00000522556 EFCAB11Q9BUY7 163 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 EPN3Q9H201 632 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 ZNF552Q9H707 407 aaPredicted RBP16.85■□□□□ 0.29
CLK4-211ENST00000522556 NT5DC2Q9H857 520 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 TMEM216Q9P0N5 145 aa16.85■□□□□ 0.29
CLK4-211ENST00000522556 SPENQ96T58 3664 aaKnown RBP16.85■□□□□ 0.29
CLK4-211ENST00000522556 IGHV1-45A0A0A0MS14 117 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 A0A1B0GTL3 188 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 CLEC3AO75596 197 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 SLU7O95391 586 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms