RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF550Q7Z398 422 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 IQCF2Q8IXL9 164 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 KCNC2Q96PR1 638 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 HERPUD2Q9BSE4 406 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 G6PC3Q9BUM1 346 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC17A9Q9BYT1 436 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 DNAJC25-GNG10A0A024R161 153 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 LNX2Q8N448 690 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 RAB2BQ8WUD1 216 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PIK3R3Q92569 461 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 POLR2J2Q9GZM3 115 aaKnown RBP15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PCDHGB2Q9Y5G2 931 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PTGESO14684 152 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PLP2Q04941 152 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PTPRCAPQ14761 206 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PACRGLQ8N7B6 248 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC39A3Q9BRY0 314 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 M0QZQ0 153 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 SWI5Q1ZZU3 235 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 OR2T5Q6IEZ7 315 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 RTL10Q7L3V2 364 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 OR2T29Q8NH02 315 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 NFKBIDQ8NI38 313 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 TNFAIP8L1Q8WVP5 186 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 SGCDQ92629 289 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 NKD1Q969G9 470 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 ADAD1Q96M93 576 aaKnown RBP15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 REEP4Q9H6H4 257 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 FTSJ1Q9UET6 329 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 ADAMTS5Q9UNA0 930 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 MBLAC1A4D2B0 266 aaPredicted RBP15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 E7ENX8 843 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 GHDCQ8N2G8 530 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 TOP1MTQ969P6 601 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 TOX2Q96NM4 488 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 GRIP1Q9Y3R0 1128 aa15.7■□□□□ 0.1
PCDHA3-201ENST00000522353 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 A0A1W2PP18 115 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 G6PDP11413 515 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 HSD3B1P14060 373 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 HSD3B2P26439 372 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TXNL4AP83876 142 aaKnown RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ARF5P84085 180 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 OLIG2Q13516 323 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TYSND1Q2T9J0 566 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ACSBG2Q5FVE4 666 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 OR5L2Q8NGL0 311 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 HTRA1Q92743 480 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF382Q96SR6 550 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TPSD1Q9BZJ3 242 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ZFR2Q9UPR6 939 aaKnown RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 PSMD9O00233 223 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 HBQ1P09105 142 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 RPS15AP62244 130 aaKnown RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 GPRIN1Q7Z2K8 1008 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 OR2L3Q8NG85 312 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ADAMTS18Q8TE60 1221 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM40Q8WWA1 233 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 EME2A4GXA9 379 aaPredicted RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF99A8MXY4 864 aaPredicted RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 FAM72CH0Y354 149 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 THEGLP0DJG4 465 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 HTRA3P83110 453 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 FAM72AQ5TYM5 149 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 FAM72DQ6L9T8 149 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 FAM72BQ86X60 149 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF689Q96CS4 500 aaPredicted RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ANKRA2Q9H9E1 313 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 BRD7Q9NPI1 651 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TNFRSF10DQ9UBN6 386 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ZDHHC2Q9UIJ5 367 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 A0A1W2PRG6 482 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 CLDN25C9JDP6 229 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 PRKD3O94806 890 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 C6orf47O95873 294 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 GBAP04062 536 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 CSTBP04080 98 aaKnown RBP15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 AQP4P55087 323 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ARFRP1Q13795 201 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TCEAL1Q15170 157 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 CSNK1A1LQ8N752 337 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 NAT14Q8WUY8 206 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 DHRS1Q96LJ7 313 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 PLCL2Q9UPR0 1127 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 IFT52Q9Y366 437 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 MAU2Q9Y6X3 613 aa15.69■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF860A6NHJ4 632 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 TLR4O00206 839 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 NOBOXO60393 691 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 CCNKO75909 580 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 NPPAP01160 153 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 LEPRP48357 1165 aaKnown RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 DNAJB13P59910 316 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 ID2Q02363 134 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 SPANXN4Q5MJ08 99 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 REEP3Q6NUK4 255 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC39A11Q8N1S5 342 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 FAM86B1Q8N7N1 296 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 OR4C15Q8NGM1 316 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms