RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 TBCCQ15814 346 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 LIPJQ5W064 366 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 NXNQ6DKJ4 435 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 IYDQ6PHW0 289 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 SUSD1Q6UWL2 747 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 LPCAT2Q7L5N7 544 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 EFL1Q7Z2Z2 1120 aaKnown RBP7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 LONP2Q86WA8 852 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 SFTPA2Q8IWL1 248 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 DDIASQ8IXT1 998 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 SFRP1Q8N474 314 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 C2orf73Q8N5S3 287 aaPredicted RBP7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 LINC01555Q8NAE3 123 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 OR52E1Q8NGJ3 308 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 CEP70Q8NHQ1 597 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 GAB3Q8WWW8 586 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 USP7Q93009 1102 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 NEIL2Q969S2 332 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 KLHL29Q96CT2 875 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 CCT7Q99832 543 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 LRRC61Q9BV99 259 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 GSDMCQ9BYG8 508 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 XKR8Q9H6D3 395 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 KIR3DX1Q9H7L2 352 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 ACTR8Q9H981 624 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 CCDC177Q9NQR7 707 aaPredicted RBP7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 GIMAP2Q9UG22 337 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 ICKQ9UPZ9 632 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 HEBP2Q9Y5Z4 205 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 KCNE2Q9Y6J6 123 aa7.55□□□□□ -1.2
CTHRC1-203ENST00000520337 SCN3AQ9NY46 2000 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 TRBV23OR9-2A0A075B6M9 112 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 CLGNO14967 610 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 BCAT2O15382 392 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 VPS4BO75351 444 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ULK1O75385 1050 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 UNC5CO95185 931 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 CBX6O95503 412 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ANP32DO95626 131 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 CHEK2O96017 543 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 PDYNP01213 254 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ALDOCP09972 364 aaKnown RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 C1GALT1C1LP0DN25 315 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 XRCC1P18887 633 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 GNAZP19086 355 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 NCF2P19878 526 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 HMOX2P30519 316 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ARL1P40616 181 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 HALP42357 657 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 CTSKP43235 329 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 RAB28P51157 221 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 NEK2P51955 445 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ERVFRD-1P60508 538 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 UBE2IP63279 158 aaKnown RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 BNC1Q01954 994 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 IRF8Q02556 426 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 KLF10Q13118 480 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 C1orf61Q13536 156 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 LAPTM5Q13571 262 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ZRSR2Q15696 482 aaKnown RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ZNF385BQ569K4 471 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 SGO1Q5FBB7 561 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 XKR6Q5GH73 641 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 WDR45BQ5MNZ6 344 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 C6orf136Q5SQH8 315 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 WASHC2DQ5SRD0 308 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 PRAMEF14Q5SWL7 426 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 CATSPEREQ5SY80 951 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ATG9BQ674R7 924 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 PMS2CLQ68D20 193 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 GRHL2Q6ISB3 625 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 IL27RAQ6UWB1 636 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 LCTLQ6UWM7 567 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 OR2L8Q8NGY9 312 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 WDR20Q8TBZ3 569 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ZFPM2Q8WW38 1151 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 PATE1Q8WXA2 126 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 SMPDL3AQ92484 453 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 TUBGCP3Q96CW5 907 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 MARK4Q96L34 752 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 MAGEB10Q96LZ2 347 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 CATSPER2Q96P56 530 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 HBEGFQ99075 208 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 EHD1Q9H4M9 534 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ERVK13-1Q9NX77 482 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 APOBEC3BQ9UH17 382 aaKnown RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ZNF490Q9ULM2 529 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 G3BP2Q9UN86 482 aaKnown RBP7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 COLEC10Q9Y6Z7 277 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 SPTBP11277 2137 aa7.54□□□□□ -1.2
CTHRC1-203ENST00000520337 ZNF318Q5VUA4 2279 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SCN2AQ99250 2005 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 A0A1B0GVT2 93 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 OR5K4A6NMS3 321 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ZNF839A8K0R7 811 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 NPIPB8E9PQR5 432 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 H0YIV9 168 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms