RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 CATSPER2Q96P56 530 aa21.45■■□□□ 1.02
SKP1-206ENST00000519321 CLK4Q9HAZ1 481 aaKnown RBP21.45■■□□□ 1.02
SKP1-206ENST00000519321 MKKSQ9NPJ1 570 aaPredicted RBP21.45■■□□□ 1.02
SKP1-206ENST00000519321 MRPS2Q9Y399 296 aaKnown RBP21.45■■□□□ 1.02
SKP1-206ENST00000519321 FER1L5A0AVI2 2057 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 USP24Q9UPU5 2620 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 A0A088AWK7 358 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 LRIT2A6NDA9 550 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 SPAG7O75391 227 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 PCNAP12004 261 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 IL1RNP18510 177 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 ZNF10P21506 573 aaPredicted RBP21.44■■□□□ 1.02
SKP1-206ENST00000519321 FOLR3P41439 243 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 PIK3CBP42338 1070 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 TGM3Q08188 693 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 HYAL2Q12891 473 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 COL9A2Q14055 689 aaPredicted RBP21.44■■□□□ 1.02
SKP1-206ENST00000519321 TNFAIP8L3Q5GJ75 292 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 TOR1AIP1Q5JTV8 583 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 DTWD1Q8N5C7 304 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 SRFBP1Q8NEF9 429 aaKnown RBP21.44■■□□□ 1.02
SKP1-206ENST00000519321 ARMC2Q8NEN0 867 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 OR52B6Q8NGF0 335 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 OR9A4Q8NGU2 314 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 OR2Y1Q8NGV0 311 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 UTP15Q8TED0 518 aaKnown RBP21.44■■□□□ 1.02
SKP1-206ENST00000519321 OXSMQ9NWU1 459 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 TRPC4Q9UBN4 977 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 RNF11Q9Y3C5 154 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 PTRH2Q9Y3E5 179 aaKnown RBP21.44■■□□□ 1.02
SKP1-206ENST00000519321 NAALAD2Q9Y3Q0 740 aa21.44■■□□□ 1.02
SKP1-206ENST00000519321 IGLV3-12A0A075B6K2 115 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 GALR3O60755 368 aaPredicted RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 KLF7O75840 302 aaPredicted RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 KLHL18O94889 574 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 ZNF888P0CJ79 500 aaPredicted RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 ATXN8OSP0DMR3 200 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 CDH13P55290 713 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 RPS18P62269 152 aaKnown RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 CDC20Q12834 499 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 TRAF3Q13114 568 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 NKG7Q16617 165 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 CPSF6Q16630 551 aaKnown RBP eCLIP21.43■■□□□ 1.02
SKP1-206ENST00000519321 UGT8Q16880 541 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 ADPRMQ3LIE5 342 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 CHSY3Q70JA7 882 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 VN1R5Q7Z5H4 357 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 AMER3Q8N944 861 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 OR2L5Q8NG80 312 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 TCP10LQ8TDR4 215 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 TRPC4APQ8TEL6 797 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 ZNF473Q8WTR7 871 aaKnown RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 SREK1Q8WXA9 508 aaKnown RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 MIEF2Q96C03 454 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 CMTM7Q96FZ5 175 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 FAR2Q96K12 515 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 PKNOX2Q96KN3 472 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 FAM111AQ96PZ2 611 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 ZNF382Q96SR6 550 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 YIPF2Q9BWQ6 316 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 REXO4Q9GZR2 422 aaKnown RBP21.43■■□□□ 1.02
SKP1-206ENST00000519321 C14orf105Q9NVL8 296 aa21.43■■□□□ 1.02
SKP1-206ENST00000519321 VSTM2BA6NLU5 285 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 H3BQF6 201 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 NKX2-8O15522 239 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 TYROBPO43914 113 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 SMIM10L1P0DMW3 83 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 LCP2Q13094 533 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 ERV3-1Q14264 604 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 SSPNQ14714 243 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 ZRSR2Q15696 482 aaKnown RBP21.42■■□□□ 1.02
SKP1-206ENST00000519321 DEFB134Q4QY38 66 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 TMEM35AQ53FP2 167 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 CFAP157Q5JU67 520 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 LIPMQ5VYY2 423 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 TRIM40Q6P9F5 258 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 EXOC3L1Q86VI1 746 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 RAB43Q86YS6 212 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 CCNYL1Q8N7R7 359 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 OR4F6Q8NGB9 312 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 STT3BQ8TCJ2 826 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 NACC2Q96BF6 587 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 MS4A6EQ96DS6 147 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 SMIM10Q96HG1 83 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 IP6K3Q96PC2 410 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 CDK15Q96Q40 435 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 CENPKQ9BS16 269 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 MS4A8Q9BY19 250 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 TGIF2Q9GZN2 237 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 C12orf65Q9H3J6 166 aaKnown RBP21.42■■□□□ 1.02
SKP1-206ENST00000519321 PSD3Q9NYI0 1048 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 TRPS1Q9UHF7 1281 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 CELSR3Q9NYQ7 3312 aa21.42■■□□□ 1.02
SKP1-206ENST00000519321 SGK494L7N484 410 aa21.41■■□□□ 1.02
SKP1-206ENST00000519321 IGHEP01854 428 aa21.41■■□□□ 1.02
SKP1-206ENST00000519321 H2AFXP16104 143 aaPredicted RBP21.41■■□□□ 1.02
SKP1-206ENST00000519321 IL10P22301 178 aa21.41■■□□□ 1.02
SKP1-206ENST00000519321 PKNOX1P55347 436 aa21.41■■□□□ 1.02
SKP1-206ENST00000519321 RAB8AP61006 207 aa21.41■■□□□ 1.02
SKP1-206ENST00000519321 TTC19Q6DKK2 380 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms