RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 GRHL2Q6ISB3 625 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 NIPAL1Q6NVV3 410 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 METTL2BQ6P1Q9 378 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 PPP1R32Q7Z5V6 425 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 PDSS2Q86YH6 399 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 ZC3H7AQ8IWR0 971 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 OR51Q1Q8NH59 317 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 UTP15Q8TED0 518 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 CREB3L4Q8TEY5 395 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 GAL3ST3Q96A11 431 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 WBP1Q96G27 269 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 FAR2Q96K12 515 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 BBC3Q96PG8 261 aaPredicted RBP13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 RBCK1Q9BYM8 510 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 SEMA3GQ9NS98 782 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 COPG2Q9UBF2 871 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 DCDC2Q9UHG0 476 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 C3orf18Q9UK00 162 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 PCTPQ9UKL6 214 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 PLAAQ9Y263 795 aa13.8□□□□□ -0.2
TOP1MT-203ENST00000517857 PCSK5Q92824 1860 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 IGLV3-12A0A075B6K2 115 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 A0A0G2JN53 185 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 COPEO14579 308 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 ERI3O43414 337 aaKnown RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 GALR3O60755 368 aaPredicted RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 CLEC3AO75596 197 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 DNAJB5O75953 348 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 MMP11P24347 488 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 HNRNPH1P31943 449 aaKnown RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 CASP2P42575 452 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 CCNG1P51959 295 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 EMP2P54851 167 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 RRADP55042 308 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 OLR1P78380 273 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 PHEXP78562 749 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 HYAL2Q12891 473 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 KCNAB2Q13303 367 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 MINDY4Q4G0A6 757 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 FAAH2Q6GMR7 532 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 TRIM40Q6P9F5 258 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 MREGQ8N565 214 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 CCDC63Q8NA47 563 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 OR5T3Q8NGG3 340 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 PPP4R1Q8TF05 950 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 VPS50Q96JG6 964 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 NSUN5Q96P11 429 aaKnown RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 IQCGQ9H095 443 aaKnown RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 ING2Q9H160 280 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 KLHL31Q9H511 634 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 NOL11Q9H8H0 719 aaKnown RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 COPS7BQ9H9Q2 264 aaPredicted RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 SEMA4BQ9NPR2 832 aaPredicted RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 P4HTMQ9NXG6 502 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 ZNF490Q9ULM2 529 aaPredicted RBP13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 SCN2AQ99250 2005 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 MGAQ8IWI9 3026 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 CACNA1GO43497 2377 aa13.79□□□□□ -0.2
TOP1MT-203ENST00000517857 A0A088AWK7 358 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 IDSB3KWA1 339 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 MKRN2OSH3BPM6 223 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 SH3BGRLO75368 114 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 WFS1O76024 890 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 RPS17P08708 135 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 SBK3P0C264 359 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 KRT4P19013 534 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 ZNF10P21506 573 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 SERPINB1P30740 379 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 CCT5P48643 541 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 PLA2G16P53816 162 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 TGM3Q08188 693 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 CPSF6Q16630 551 aaKnown RBP eCLIP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 LIPJQ5W064 366 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 MED25Q71SY5 747 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 RPS27LQ71UM5 84 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 VN1R5Q7Z5H4 357 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 APLFQ8IW19 511 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 EXD3Q8N9H8 876 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 TMEM102Q8N9M5 508 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 LSM14AQ8ND56 463 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 REPS1Q96D71 796 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 PEX11GQ96HA9 241 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 FER1L6-AS2Q96M78 137 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 CDK15Q96Q40 435 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 TRIM55Q9BYV6 548 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 REXO4Q9GZR2 422 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 ADNPQ9H2P0 1102 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 RHBGQ9H310 441 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 FBXL4Q9UKA2 621 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
TOP1MT-203ENST00000517857 G3BP2Q9UN86 482 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms