RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 HAGHLQ6PII5 290 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PAQR3Q6TCH7 311 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 KLHL17Q6TDP4 642 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 AFTPHQ6ULP2 937 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 UQCC3Q6UW78 93 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 GDPGP1Q6ZNW5 385 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM92BQ6ZTR7 304 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SH2D5Q6ZV89 423 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PDZD4Q76G19 769 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SHFQ7M4L6 423 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADGRD2Q7Z7M1 963 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCDC190Q86UF4 302 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PROSER1Q86XN7 944 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RHOT1Q8IXI2 618 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 MCOLN2Q8IZK6 566 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ABRAQ8N0Z2 381 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NLGN1Q8N2Q7 840 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 LNX2Q8N448 690 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 C9orf62Q8N4C0 152 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 DNAJC22Q8N4W6 341 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPM1NQ8N819 430 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLB1L3Q8NCI6 653 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PAPD5Q8NDF8 572 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 C19orf18Q8NEA5 215 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 DENND6BQ8NEG7 585 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR4M1Q8NGD0 313 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 DTD1Q8TEA8 209 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF384Q8TF68 577 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLYATL2Q8WU03 294 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNF139Q8WU17 664 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM216AQ8WUB2 273 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC5A11Q8WWX8 675 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ATG4AQ8WYN0 398 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PIGKQ92643 395 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 S100PBPQ96BU1 408 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCMH1Q96GD3 660 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SUCLG2Q96I99 432 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR52B2Q96RD2 323 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 LMF1Q96S06 567 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PIGSQ96S52 555 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 KCNJ15Q99712 375 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 P2RY13Q9BPV8 354 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 KCNS3Q9BQ31 491 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF559Q9BR84 538 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NTMT1Q9BV86 223 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ITPAQ9BY32 194 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 UGT2B28Q9BY64 529 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 METTL8Q9H825 291 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SEBOXQ9HB31 216 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARNT2Q9HBZ2 717 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NANSQ9NR45 359 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ASAH2Q9NR71 780 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PDGFCQ9NRA1 345 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NSMCE4AQ9NXX6 385 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 COQ3Q9NZJ6 369 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 HSPBP1Q9NZL4 362 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC9A2Q9UBY0 812 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLCO3A1Q9UIG8 710 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 C3orf18Q9UK00 162 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHA1Q9Y5I3 950 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 KLK4Q9Y5K2 254 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NUBP2Q9Y5Y2 271 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 U3KQV3 271 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTPRMP28827 1452 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ERCC6L2Q5T890 1561 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLYATL1P3A0A0U1RQE8 302 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GNG14A0A1W2PPG7 69 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 hCG_1642624A0A1W2PR95 340 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRAPPC13A5PLN9 417 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCDC85CA6NKD9 419 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MARCH11A6NNE9 402 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 C1orf196B1AJZ1 125 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPR89AB7ZAQ6 455 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TSTD3H0UI37 97 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM189-UBE2V1I3L0A0 370 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 M0R233 179 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 DNASE2O00115 360 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARVCFO00192 962 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 UBE2CO00762 179 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPR171O14626 319 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADAM10O14672 748 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF197O14709 1029 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ITGB1BP1O14713 200 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PDCD5O14737 125 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCAMP1O15126 338 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CLDN3O15551 220 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HCRTR2O43614 444 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RGS10O43665 173 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 VEGFDO43915 354 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRKYO43930 277 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 LCMT2O60294 686 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 NOBOXO60393 691 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FADS1O60427 444 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SDC3O75056 442 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ERN1O75460 977 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ITGA10O75578 1167 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RFPL1O75677 317 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 EIF3GO75821 320 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SRP72O76094 671 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HSPA4LO95757 839 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms