RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ERI3O43414 337 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CCNB2O95067 398 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ALPLP05186 524 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 MYL9P24844 172 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 TM4SF4P48230 202 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 RPL34P49207 117 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 HNMTP50135 292 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 PGDP52209 483 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 SELPLGQ14242 412 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLCA4Q14CN2 919 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRAMEF14Q5SWL7 426 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRAMEF13Q5VWM6 474 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CXorf57Q6NSI4 855 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 MZT2BQ6NZ67 158 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 FCGR1BQ92637 280 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 KCNJ9Q92806 393 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 TRIM63Q969Q1 353 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 LGALS12Q96DT0 336 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ALPK1Q96QP1 1244 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ATOH8Q96SQ7 321 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLDND1Q9NY35 253 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 SATB2Q9UPW6 733 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 OXSR1O95747 527 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 FSHRP23945 695 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ERVPABLB-1P60509 514 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 STXBP1P61764 594 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 MEF2AQ02078 507 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 LGALS3BPQ08380 585 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ABRAXAS2Q15018 415 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 RNASE12Q5GAN4 147 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM207Q6UWW9 146 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CXXC5Q7LFL8 322 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 THOC6Q86W42 341 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 NXPE1Q8N323 547 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 MOSPD2Q8NHP6 518 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 BPIFB1Q8TDL5 484 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 WFIKKN2Q8TEU8 576 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 KCNC2Q96PR1 638 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 IL4I1Q96RQ9 567 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 PKP4Q99569 1192 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CCM2Q9BSQ5 444 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR51V1Q9H2C8 321 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 NECTIN3Q9NQS3 549 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 FBXL12Q9NXK8 326 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 NKIRAS2Q9NYR9 191 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 M0QX08 132 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 SEC14L2O76054 403 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 NKX2-5P52952 324 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ADARB1P78563 741 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 GRSF1Q12849 480 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 PON2Q15165 354 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 C18orf21Q32NC0 220 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 GPR151Q8TDV0 419 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CEP295NLQ96MC4 621 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC38A3Q99624 504 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC35A5Q9BS91 424 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF282Q9UDV7 671 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNFX1Q9P2E3 1918 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 RGPD3A6NKT7 1758 aaPredicted RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 RGPD4Q7Z3J3 1758 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF840PA6NDX5 716 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 CCDC182A6NF36 153 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 COQ9O75208 318 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 IFNGP01579 166 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 RPS17P08708 135 aaKnown RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 VIPR1P32241 457 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 AVPR1BP47901 424 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 NRIP1P48552 1158 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 NUDT6P53370 316 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 RAB8AP61006 207 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 DSC3Q14574 896 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 UBXN2BQ14CS0 331 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 RAB41Q5JT25 222 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM131AQ6UXB0 335 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 KRT77Q7Z794 578 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF296Q8WUU4 475 aaPredicted RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 SORCS1Q8WY21 1168 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC35G5Q96KT7 338 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 TEX37Q96LM6 180 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF354BQ96LW1 612 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 C5orf34Q96MH7 638 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 POLR2J3Q9H1A7 115 aaKnown RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 TUBB1Q9H4B7 451 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 MANBAO00462 879 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PAK4O96013 591 aaPredicted RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 ITIH1P19827 911 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 FPR1P21462 350 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 DCTP40126 519 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 SEMA3AQ14563 771 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC7A5P1Q8MH63 180 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLIP4Q8N3C7 705 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 CELF5Q8N6W0 485 aaKnown RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 HMGCLL1Q8TB92 370 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 FLRT1Q9NZU1 646 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms