RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 FAM120BQ96EK7 910 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NRBF2Q96F24 287 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MAGED4Q96JG8 741 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HRASLS5Q96KN8 279 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MAGEB10Q96LZ2 347 aaPredicted RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 YME1L1Q96TA2 773 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MTERF1Q99551 399 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZBTB18Q99592 522 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HEPHQ9BQS7 1158 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FUNDC2Q9BWH2 189 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MS4A8Q9BY19 250 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 UGT2B28Q9BY64 529 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZDHHC5Q9C0B5 715 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BHLHE41Q9C0J9 482 aaPredicted RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLIRPQ9GZT3 109 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ATG10Q9H0Y0 220 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LINC00597Q9H2U6 94 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM245Q9H330 911 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ELOVL6Q9H5J4 265 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EPHX3Q9H6B9 360 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TPT1P8Q9HAU6 139 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IL23AQ9NPF7 189 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 WASH6PQ9NQA3 447 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FBXO8Q9NRD0 319 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AASDHPPTQ9NRN7 309 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C1GALT1Q9NS00 363 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TDP1Q9NUW8 608 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TBCCD1Q9NVR7 557 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RLIMQ9NVW2 624 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 THUMPD1Q9NXG2 353 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LMCD1Q9NZU5 365 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NDUFAF4Q9P032 175 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TAAR2Q9P1P5 351 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 THEGQ9P2T0 379 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AASSQ9UDR5 926 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IL36AQ9UHA7 158 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ACAD8Q9UKU7 415 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC6A14Q9UN76 642 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SAMD4AQ9UPU9 718 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 B3GNT3Q9Y2A9 372 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ATP11BQ9Y2G3 1177 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 COQ6Q9Y2Z9 468 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LSM2Q9Y333 95 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 INSL6Q9Y581 213 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PCDHB11Q9Y5F2 797 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CFAP20Q9Y6A4 193 aaKnown RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HSPE1-MOB4S4R3N1 261 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SPEGQ15772 3267 aa3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ARID1BQ8NFD5 2236 aaPredicted RBP3.12□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CACNA1EQ15878 2313 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KIF26BQ2KJY2 2108 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 VCANP13611 3396 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ASXL3Q9C0F0 2248 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PRAMEF33A0A0G2JMD5 474 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PRAMEF27A3QJZ7 478 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LINC01553A4QN01 128 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CCDC160A6NGH7 325 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 METTL15A6NJ78 407 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GABRR3A8MPY1 467 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 J3QRK9 145 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FOXE1O00358 373 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PLK4O00444 970 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PLPP1O14494 284 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FFAR1O14842 300 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KPNA5O15131 536 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HS6ST1O60243 411 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MAN1A2O60476 641 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MRPS14O60783 128 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PRAMEF10O60809 474 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EFCAB14O75071 495 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADAM23O75077 832 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BCAS1O75363 584 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CLPXO76031 633 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SEMA3DO95025 777 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FGF19O95750 216 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF682O95780 498 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FADS2O95864 444 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C6orf47O95873 294 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OPN1SWP03999 348 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CATP04040 527 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FABP3P05413 133 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LCKP06239 509 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RB1P06400 928 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HNRNPA1P09651 372 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ELFN1P0C7U0 828 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADORA3P0DMS8 318 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ACRP10323 421 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADH5P11766 374 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ETFAP13804 333 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADRB3P13945 408 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 COX7A2P14406 83 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CCNA2P20248 432 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ENDOUP21128 410 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PSMB5P28074 263 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CD40LGP29965 261 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ALDH4A1P30038 563 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PBLDP30039 288 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PEBP1P30086 187 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RRM2P31350 389 aa3.11□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DNAJA1P31689 397 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms