RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 MTERF1Q99551 399 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 SIKE1Q9BRV8 207 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 DDA1Q9BW61 102 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 MS4A8Q9BY19 250 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 SLC6A16Q9GZN6 736 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 ROGDIQ9GZN7 287 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 C20orf27Q9GZN8 174 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 REXO4Q9GZR2 422 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 SPRTNQ9H040 489 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 POLR1BQ9H9Y6 1135 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 CLK4Q9HAZ1 481 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 DMRT3Q9NQL9 472 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 RIC8BQ9NVN3 520 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 PNPOQ9NVS9 261 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 SRPK3Q9UPE1 567 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 RUVBL1Q9Y265 456 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 PCDHB3Q9Y5E6 796 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 PCDHGA3Q9Y5H0 932 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 DNAJC15Q9Y5T4 150 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 SLC22A7Q9Y694 548 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 DMXL2Q8TDJ6 3036 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ACACAQ13085 2346 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 FAM149AA5PLN7 773 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 GMNCA6NCL1 334 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TMEM8BA6NDV4 472 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 MAGEB17A8MXT2 336 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 AGRPO00253 132 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 NVLO15381 856 aaKnown RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF749O43361 778 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 NRP2O60462 931 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 EDF1O60869 148 aaKnown RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SCRG1O75711 98 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 MYO1DO94832 1006 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SEMA3DO95025 777 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TNFSF15O95150 251 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 KLK3P07288 261 aaPredicted RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SMIM10L1P0DMW3 83 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TROVE2P10155 538 aaKnown RBP eCLIP6.73□□□□□ -1.333e-78■■■■□ 19.8
SCARNA6-201ENST00000515982 KITP10721 976 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 CCL4P13236 92 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PCSK2P16519 638 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 AGXTP21549 392 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ARRB2P32121 409 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TSFMP43897 325 aaKnown RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 AVPR1BP47901 424 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 RAP1GDS1P52306 607 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 MAPK10P53779 464 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 FOXA1P55317 472 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 GNGT1P63211 74 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ABRAXAS2Q15018 415 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 HERC3Q15034 1050 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 AP5B1Q2VPB7 878 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 DEFB110Q30KQ9 67 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ADPRMQ3LIE5 342 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 C3orf38Q5JPI3 329 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TOR1AIP1Q5JTV8 583 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SPDYAQ5MJ70 313 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 KHDRBS2Q5VWX1 349 aaKnown RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 CLEC6AQ6EIG7 209 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TMEM214Q6NUQ4 689 aaKnown RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PRMT9Q6P2P2 845 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TRIM40Q6P9F5 258 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 IGF2-ASQ6U949 168 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SCIMPQ6UWF3 145 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ATG14Q6ZNE5 492 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PAGE2Q7Z2X7 111 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TMEM126BQ8IUX1 230 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PARP9Q8IXQ6 854 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 DDIASQ8IXT1 998 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 OR2L5Q8NG80 312 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 AGR3Q8TD06 166 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TWIST2Q8WVJ9 160 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 GATA6Q92908 595 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 GAL3ST3Q96A11 431 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 MS4A6EQ96DS6 147 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 CHMP6Q96FZ7 201 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SMIM10Q96HG1 83 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PPP3R2Q96LZ3 170 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 KCNC2Q96PR1 638 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 F2RL3Q96RI0 385 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 KCNA7Q96RP8 456 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TBCDQ9BTW9 1192 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TRIM55Q9BYV6 548 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 OR51B5Q9H339 312 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ACTR5Q9H9F9 607 aaPredicted RBP6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ANKHQ9HCJ1 492 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TNFRSF12AQ9NP84 129 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SLCO1B3Q9NPD5 702 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 CUTCQ9NTM9 273 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 TXLNGQ9NUQ3 528 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 VPS29Q9UBQ0 182 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PISDQ9UG56 409 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SLC12A4Q9UP95 1085 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 SATB2Q9UPW6 733 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 FIS1Q9Y3D6 152 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 PTPRBP23467 1997 aa6.73□□□□□ -1.33
SCARNA6-201ENST00000515982 ARHGAP10A1A4S6 786 aa6.72□□□□□ -1.33
SCARNA6-201ENST00000515982 NPIPB8E9PQR5 432 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms