RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 C3orf14Q9HBI5 128 aa3.92□□□□□ -1.78
SMARCA5-203ENST00000515531 PDRG1Q9NUG6 133 aa3.92□□□□□ -1.78
SMARCA5-203ENST00000515531 TMOD3Q9NYL9 352 aa3.92□□□□□ -1.78
SMARCA5-203ENST00000515531 THAP10Q9P2Z0 257 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-203ENST00000515531 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
SMARCA5-203ENST00000515531 KLK11Q9UBX7 282 aa3.92□□□□□ -1.78
SMARCA5-203ENST00000515531 TDRD15B5MCY1 1934 aaKnown RBP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 G3V2L1 256 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 PGRMC2O15173 223 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 ECE2O60344 883 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 TBCAO75347 108 aaKnown RBP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 MT-ND2P03891 347 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 EEF2P13639 858 aaKnown RBP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 LBPP18428 481 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 CTNNA2P26232 953 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 PSMB4P28070 264 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 PKLRP30613 574 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 NDST2P52849 883 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 TSPY1Q01534 308 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 KIAA0141Q14154 515 aaPredicted RBP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 CDO1Q16878 200 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 FAM46CQ5VWP2 391 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 TMEM182Q6ZP80 229 aaPredicted RBP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 COX8CQ7Z4L0 72 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 CDC20BQ86Y33 519 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 ERC1Q8IUD2 1116 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 C4orf19Q8IY42 314 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 THNSL1Q8IYQ7 743 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 EXOC4Q96A65 974 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 UBQLN3Q9H347 655 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 DPEP2Q9H4A9 486 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 PCNX3Q9H6A9 2034 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 CHCHD3Q9NX63 227 aaKnown RBP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 GIMAP2Q9UG22 337 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 GMEB2Q9UKD1 530 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 NEDD4P46934 1319 aa3.91□□□□□ -1.78
SMARCA5-203ENST00000515531 NOTCH3Q9UM47 2321 aa3.9□□□□□ -1.78
SMARCA5-203ENST00000515531 A0A1W2PPR1 153 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 GLTPD2A6NH11 291 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 ACOD1A6NK06 481 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 WDR46O15213 610 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 SNAP91O60641 907 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 FAM58BPP0C7Q3 252 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 SP9P0CG40 484 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 GOT1P17174 413 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 HOXC13P31276 330 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 FEN1P39748 380 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 GP5P40197 560 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 PTENP60484 403 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 CD300CQ08708 224 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 RIGQ13278 110 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 ZNF146Q15072 292 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 PPA1Q15181 289 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 TWISTNBQ3B726 338 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 TXNRD3NBQ6F5E7 133 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 PET117Q6UWS5 81 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 TRMT11Q7Z4G4 463 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 SPATA19Q7Z5L4 167 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 C5orf24Q7Z6I8 188 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 OR4N5Q8IXE1 308 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 POM121L12Q8N7R1 296 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 OR9Q2Q8NGE9 314 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 RIT1Q92963 219 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 BSCL2Q96G97 398 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 LURAP1Q96LR2 239 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 ZNF597Q96LX8 424 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 FOXN4Q96NZ1 517 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 PSMB7Q99436 277 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 ATF6BQ99941 703 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 PAPOLGQ9BWT3 736 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 PUS3Q9BZE2 481 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 LMAN1LQ9HAT1 526 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 RAB9BQ9NP90 201 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 SLC7A10Q9NS82 523 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 GTSE1Q9NYZ3 720 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 DBF4Q9UBU7 674 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 SATB2Q9UPW6 733 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 KLK4Q9Y5K2 254 aa3.9□□□□□ -1.79
SMARCA5-203ENST00000515531 IGLV4-3A0A075B6K6 122 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 IGHV3-38A0A0C4DH36 116 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 RNF103O00237 685 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 ANKRD34CP0C6C1 535 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 PCP11498 1178 aaKnown RBP3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 EDNRAP25101 427 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 FKBP3Q00688 224 aaKnown RBP3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 GRB14Q14449 540 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 SPANXN4Q5MJ08 99 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 TRAT1Q6PIZ9 186 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 C15orf52Q6ZUT6 534 aaKnown RBP3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 SLC47A2Q86VL8 602 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 RNF130Q86XS8 419 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 SPAG16Q8N0X2 631 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 TEX26Q8N6G2 289 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 OR5M9Q8NGP3 310 aa3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.89□□□□□ -1.79
SMARCA5-203ENST00000515531 TOMM40LQ969M1 308 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms