RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 RNF6Q9Y252 685 aa14.75□□□□□ -0.05
LMNA-223ENST00000515459 HRH3Q9Y5N1 445 aa14.75□□□□□ -0.05
LMNA-223ENST00000515459 USP27XA6NNY8 438 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 NDUFS4O43181 175 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CHST10O43529 356 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 GALR3O60755 368 aaPredicted RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 AVILO75366 819 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 TOXO94900 526 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 F7P08709 466 aaPredicted RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 CDH1P12830 882 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CD99P14209 185 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CCND1P24385 295 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 RFC3P40938 356 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 MEF2AQ02078 507 aaPredicted RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 CTBP1Q13363 440 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 THOC5Q13769 683 aaKnown RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 DHX34Q14147 1143 aaKnown RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 SIX1Q15475 284 aaPredicted RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 DEFB134Q4QY38 66 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CMPK2Q5EBM0 449 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CES4AQ5XG92 561 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 NIPAL1Q6NVV3 410 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CASC4Q6P4E1 433 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 ZNF549Q6P9A3 640 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 DENND6AQ8IWF6 608 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CPNE9Q8IYJ1 553 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 ARMC10Q8N2F6 343 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 AFAP1L2Q8N4X5 818 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 RNF10Q8N5U6 811 aaKnown RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 ZNF740Q8NDX6 193 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 CD200R1Q8TD46 325 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 PTCHD1Q96NR3 888 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 DESI2Q9BSY9 194 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 DEFB126Q9BYW3 111 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 UCK2Q9BZX2 261 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 ATG10Q9H0Y0 220 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 FBXO6Q9NRD1 293 aaPredicted RBP14.74□□□□□ -0.05
LMNA-223ENST00000515459 KCNN3Q9UGI6 736 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 COMMD10Q9Y6G5 202 aa14.74□□□□□ -0.05
LMNA-223ENST00000515459 PHF3Q92576 2039 aaKnown RBP14.73□□□□□ -0.05
LMNA-223ENST00000515459 SPG11Q96JI7 2443 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 TCRBV7S3A2A0A539 114 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 SAGE2PA6NJ88 616 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 EIF3FO00303 357 aaPredicted RBP14.73□□□□□ -0.05
LMNA-223ENST00000515459 PEX1O43933 1283 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 B4GALT2O60909 372 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 ALOX12P18054 663 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 DNAJA1P31689 397 aaKnown RBP14.73□□□□□ -0.05
LMNA-223ENST00000515459 ZNF75DP51815 510 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 OLR1P78380 273 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 SARNPP82979 210 aaKnown RBP14.73□□□□□ -0.05
LMNA-223ENST00000515459 NAE1Q13564 534 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 PWP1Q13610 501 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 LRRC8EQ6NSJ5 796 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 ARHGAP11AQ6P4F7 1023 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 AGTRAPQ6RW13 159 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 LCTLQ6UWM7 567 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 QSOX2Q6ZRP7 698 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 ALKBH8Q96BT7 664 aaKnown RBP14.73□□□□□ -0.05
LMNA-223ENST00000515459 TMUB1Q9BVT8 246 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 SLC24A3Q9HC58 644 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 SAMD15Q9P1V8 674 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 PDE10AQ9Y233 779 aa14.73□□□□□ -0.05
LMNA-223ENST00000515459 FAM237BA0A1B0GVD1 139 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 MAGEB16A2A368 324 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 FAM221AA4D161 298 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 OR1F1O43749 312 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 CEP104O60308 925 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 DNAJB6O75190 326 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 C8GP07360 202 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 HOXD4P09016 255 aaPredicted RBP14.72□□□□□ -0.05
LMNA-223ENST00000515459 NPPBP16860 134 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 CCR8P51685 355 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 BTG2P78543 158 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 MBOAT1Q6ZNC8 495 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 PALM2Q8IXS6 379 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 CYP4Z2PQ8N1L4 340 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 ZFP62Q8NB50 900 aaPredicted RBP14.72□□□□□ -0.05
LMNA-223ENST00000515459 NFAM1Q8NET5 270 aaPredicted RBP14.72□□□□□ -0.05
LMNA-223ENST00000515459 ZNF669Q96BR6 464 aaPredicted RBP14.72□□□□□ -0.05
LMNA-223ENST00000515459 SARGQ9BW04 601 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 SGPP1Q9BX95 441 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 PARVBQ9HBI1 364 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 PLSCR2Q9NRY7 297 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 ADAMTS6Q9UKP5 1117 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 ZKSCAN5Q9Y2L8 839 aa14.72□□□□□ -0.05
LMNA-223ENST00000515459 TCRBV16S1A1N1A0A5B0 115 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 PDE9AO76083 593 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 ZWINTO95229 277 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 SERPIND1P05546 499 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 MAOAP21397 527 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 SLC1A2P43004 574 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 KCNJ1P48048 391 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 IST1P53990 364 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 TERF1P54274 439 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 GPR85P60893 370 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 RGS1Q08116 209 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 PMPCAQ10713 525 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 MYBPHQ13203 477 aa14.71□□□□□ -0.05
LMNA-223ENST00000515459 PAOXQ6QHF9 649 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms