RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 NCF4Q15080 339 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SPHARQ15513 63 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 TMEM81Q6P7N7 255 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SLC27A1Q6PCB7 646 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF704Q6ZNC4 412 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 GALNT10Q86SR1 603 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SLC34A3Q8N130 599 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 DCBLD1Q8N8Z6 715 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 C3orf58Q8NDZ4 430 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 OR7D4Q8NG98 312 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 VANGL1Q8TAA9 524 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 UTP15Q8TED0 518 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 EDEM1Q92611 657 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ESAMQ96AP7 390 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 DACT3Q96B18 629 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 PDXPQ96GD0 296 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SOSTQ9BQB4 213 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 MND1Q9BWT6 205 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 NLKQ9UBE8 527 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 PLEKHB1Q9UF11 243 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 MGAT4AQ9UM21 535 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 GABRQQ9UN88 632 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ASB1Q9Y576 335 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 RLFQ13129 1914 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 LOC285556D6RIA3 1793 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 PCM1Q15154 2024 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 PCP4L1A6NKN8 68 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 RFXANKO14593 260 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 ADAM11O75078 769 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 KCNK5O95279 499 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 PKMP14618 531 aaKnown RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 GPX2P18283 190 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 F8A1P23610 371 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 CCT3P49368 545 aaKnown RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 MAN2A2P49641 1150 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 HSF2Q03933 536 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 MLLT11Q13015 90 aaPredicted RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 BHLHA9Q7RTU4 235 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 LUZP2Q86TE4 346 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 Q8N402 240 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 TEX26Q8N6G2 289 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 NELL1Q92832 810 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 UPRTQ96BW1 309 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 ZBED6CLQ96FA7 236 aaPredicted RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 CDKN2AIPNLQ96HQ2 116 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 SMOQ99835 787 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 CXCL16Q9H2A7 254 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 OR51B5Q9H339 312 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 HEXA-AS1Q9H8Q6 139 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 MKL2Q9ULH7 1088 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 KLF2Q9Y5W3 355 aaPredicted RBP12.35□□□□□ -0.43
SMAD1-215ENST00000515385 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
SMAD1-215ENST00000515385 CIB4A0PJX0 185 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SLC30A4O14863 429 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PCDH17O14917 1159 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SUV39H1O43463 412 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 ULK1O75385 1050 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 IGLV3-25P01717 112 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 BCKDHAP12694 445 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 INSRRP14616 1297 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 INPP1P49441 399 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 DSC2Q02487 901 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 DBPQ10586 325 aaPredicted RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 HNRNPA0Q13151 305 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TNFAIP1Q13829 316 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 C1DQ13901 141 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 POU4F3Q15319 338 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 MICAQ29983 383 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PTCHD3Q3KNS1 767 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 KLHL22Q53GT1 634 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 FCRLBQ6BAA4 426 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 MSANTD2Q6P1R3 559 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SUSD1Q6UWL2 747 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TMEM107Q6UX40 140 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 KIAA1324Q6UXG2 1013 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SLC5A8Q8N695 610 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SLC22A8Q8TCC7 542 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 UFD1Q92890 307 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 NXPE3Q969Y0 559 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 MTERF3Q96E29 417 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 HBEGFQ99075 208 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 INPP5KQ9BT40 448 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TMEM43Q9BTV4 400 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 MED28Q9H204 178 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PPP1R3EQ9H7J1 279 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 AGO3Q9H9G7 860 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 GALNT9Q9HCQ5 603 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms