RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 XRCC1P18887 633 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 XPAP23025 273 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RPL10P27635 214 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ACADLP28330 430 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 EPHA3P29320 983 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NUP62P37198 522 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SPAM1P38567 509 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC1A3P43003 542 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NAGLUP54802 743 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 MAXP61244 160 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM189BP81408 668 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PSMD5Q16401 504 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 AAK1Q2M2I8 961 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF805Q5CZA5 627 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 INTS11Q5TA45 600 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 WDR73Q6P4I2 378 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TFAP2DQ7Z6R9 452 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SLCO6A1Q86UG4 719 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 LYSMD2Q8IV50 215 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM217AQ8IXS0 508 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 LGI2Q8N0V4 545 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TXNDC5Q8NBS9 432 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 OR7G3Q8NG95 312 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 GPR152Q8TDT2 470 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SH3RF2Q8TEC5 729 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RAB2BQ8WUD1 216 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 CMTM5Q96DZ9 223 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FUBP3Q96I24 572 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 MAGEB10Q96LZ2 347 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 KLHL5Q96PQ7 755 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 LENG8Q96PV6 779 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 KCTD14Q9BQ13 255 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 HTATIP2Q9BUP3 242 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PTDSS2Q9BVG9 487 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FSD1LQ9BXM9 530 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 MIR1-1HGQ9H1L0 117 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 CRISPLD1Q9H336 500 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ZCCHC4Q9H5U6 513 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 C11orf49Q9H6J7 331 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PAK6Q9NQU5 681 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 BABAM2Q9NXR7 383 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 GLS2Q9UI32 602 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 COPG1Q9Y678 874 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TET1Q8NFU7 2136 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM221AA4D161 298 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TMEM233B4DJY2 109 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SOAT2O75908 522 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TBX18O95935 607 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 EOMESO95936 686 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 IGLV3-27P01718 113 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 IFNA4P05014 189 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ATXN1LP0C7T5 689 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ARSAP15289 507 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 CKMT2P17540 419 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ERP29P30040 261 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ALDH9A1P49189 494 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TAP2Q03519 686 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 KIF19Q2TAC6 998 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 AP5B1Q2VPB7 878 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TECRLQ5HYJ1 363 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TMEM198Q66K66 360 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PTRHD1Q6GMV3 140 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TFAP2EQ6VUC0 442 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 USP45Q70EL2 814 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NUDT13Q86X67 352 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ARRDC2Q8TBH0 407 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NSMCE2Q96MF7 247 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FRMD6Q96NE9 622 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SOX7Q9BT81 388 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 MS4A7Q9GZW8 240 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF768Q9H5H4 540 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 LDAHQ9H6V9 325 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TNFRSF12AQ9NP84 129 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ITM2CQ9NQX7 267 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FBXO5Q9UKT4 447 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ABCG2Q9UNQ0 655 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NOD1Q9Y239 953 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 POMPQ9Y244 141 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NEMP2A6NFY4 417 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 MROH6A6NGR9 719 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FOXE1O00358 373 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 GSTA4O15217 222 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 UPK1BO75841 260 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 OR2B3O76000 313 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PDE9AO76083 593 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RHOQP17081 205 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 FPR3P25089 353 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 EPHA5P54756 1037 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PKNOX1P55347 436 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 HTRA4P83105 476 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SREBF2Q12772 1141 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PUM1Q14671 1186 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SMCO1Q147U7 214 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ARHGAP19Q14CB8 494 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NRF1Q16656 503 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 OR2B11Q5JQS5 317 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SEL1L3Q68CR1 1132 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RSPO2Q6UXX9 243 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC24A5Q71RS6 500 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms