RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 BAK1Q16611 211 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 PXDC1Q5TGL8 231 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 GLCCI1Q86VQ1 547 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ZZZ3Q8IYH5 903 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 LGI4Q8N135 537 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 YIPF7Q8N8F6 280 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 PIH1D2Q8WWB5 315 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ISG20Q96AZ6 181 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 ST6GAL2Q96JF0 529 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 COPS8Q99627 209 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 C1QTNF3Q9BXJ4 246 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 TM6SF2Q9BZW4 377 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 SLA2Q9H6Q3 261 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ARL15Q9NXU5 204 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ZNF222Q9UK12 451 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 FCF1Q9Y324 198 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 PCDHB1Q9Y5F3 818 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 BPTFQ12830 3046 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 GREB1Q4ZG55 1949 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CLCA1A8K7I4 914 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 GFRA2O00451 464 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 KLK8O60259 260 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 WBP4O75554 376 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 TSPAN12O95859 305 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 RETP07949 1114 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CDC42P60953 191 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 ATXN7L2Q5T6C5 722 aaPredicted RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 NCEH1Q6PIU2 408 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CERS6Q6ZMG9 384 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 LINC00299Q6ZSB3 139 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SZRD1Q7Z422 152 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 FAM109AQ8N4B1 249 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SLC5A8Q8N695 610 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CD99L2Q8TCZ2 262 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 HDHD2Q9H0R4 259 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 DLGAP4Q9Y2H0 992 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 FAM220BPB1ANY3 271 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 PRRG1O14668 218 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 MYL12BO14950 172 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SOX14O95416 240 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 F11P03951 625 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CD72P21854 359 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CD9P21926 228 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 ITPKAP23677 461 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 TACR1P25103 407 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 PSMA1P25786 263 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 KDELR2P33947 212 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 FADDQ13158 208 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 CAPN13Q6MZZ7 669 aaPredicted RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 SNX20Q7Z614 316 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 TRIM69Q86WT6 500 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 MSRB3Q8IXL7 192 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 RNF175Q8N4F7 328 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SLC43A3Q8NBI5 491 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 OR9Q2Q8NGE9 314 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 BCL7CQ8WUZ0 217 aaPredicted RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 BTBD2Q9BX70 525 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CWH43Q9H720 699 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 ING3Q9NXR8 418 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 DNAJC27Q9NZQ0 273 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CRLS1Q9UJA2 301 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 RABL2BQ9UNT1 228 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 DHRS7Q9Y394 339 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 GRIP1Q9Y3R0 1128 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 C2orf78A6NCI8 922 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 HMX3A6NHT5 357 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 KPNA5O15131 536 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SERPINI2O75830 405 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 SLC25A14O95258 325 aaPredicted RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 CDK1P06493 297 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 NUDT7P0C024 238 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 PRR35P0CG20 571 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 JUNDP17535 347 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CXCR4P61073 352 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 HNRNPA0Q13151 305 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 SLC14A1Q13336 389 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 RNASE12Q5GAN4 147 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 CXorf57Q6NSI4 855 aaKnown RBP9.3□□□□□ -0.92
VCAN-210ENST00000513960 C16orf62Q7Z3J2 963 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 ZSWIM9Q86XI8 627 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 IQCF2Q8IXL9 164 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CLECL1Q8IZS7 167 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 GPR156Q8NFN8 814 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 C1GALT1C1Q96EU7 318 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 MSANTD3Q96H12 275 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CCDC115Q96NT0 180 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 TCF25Q9BQ70 676 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CLSTN3Q9BQT9 956 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 ASB8Q9H765 288 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 CLN6Q9NWW5 311 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 IL17CQ9P0M4 197 aa9.3□□□□□ -0.92
VCAN-210ENST00000513960 A8MUA0 341 aa9.29□□□□□ -0.92
VCAN-210ENST00000513960 MAGEB17A8MXT2 336 aa9.29□□□□□ -0.92
VCAN-210ENST00000513960 H7C0S8 307 aa9.29□□□□□ -0.92
VCAN-210ENST00000513960 PLK4O00444 970 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms