RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 EBF4Q9BQW3 602 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 MS4A8Q9BY19 250 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 REXO4Q9GZR2 422 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 AKTIPQ9H8T0 292 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 COPS7BQ9H9Q2 264 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 KCNK13Q9HB14 408 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NOP53Q9NZM5 478 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 TMEM9Q9P0T7 183 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 SEMA5BQ9P283 1151 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 PDP2Q9P2J9 529 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 SERTAD3Q9UJW9 196 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 USP24Q9UPU5 2620 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 RUVBL1Q9Y265 456 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 PTGDR2Q9Y5Y4 395 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 E9PBE3 544 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 NPIPB8E9PQR5 432 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 H0YGG7 62 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 KLHL41O60662 606 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 MSL3P1P0C860 447 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 IDO1P14902 403 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 ACPPP15309 386 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 SSR2P43308 183 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 TSFMP43897 325 aaKnown RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 ARF3P61204 181 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 RPL38P63173 70 aaKnown RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 CFHR1Q03591 330 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 EMX2Q04743 252 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 TUBB3Q13509 450 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 GSTA3Q16772 222 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 LSM12Q3MHD2 195 aaKnown RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 TOR1AIP1Q5JTV8 583 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 C6orf136Q5SQH8 315 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 DEPDC1Q5TB30 811 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 LARP4Q71RC2 724 aaKnown RBP eCLIP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 ARHGAP22Q7Z5H3 698 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 NUDT13Q86X67 352 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 DNAJC22Q8N4W6 341 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 ZNF454Q8N9F8 522 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 AGBL5Q8NDL9 886 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 DEFB124Q8NES8 71 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 OR2L5Q8NG80 312 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 OR2T11Q8NH01 316 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 OR8K5Q8NH50 307 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 CREB3L4Q8TEY5 395 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 GAL3ST3Q96A11 431 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 PRR11Q96HE9 360 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 C3orf30Q96M34 536 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 LRRC37BQ96QE4 947 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 OR52B2Q96RD2 323 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 RTKNQ9BST9 563 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 TBCDQ9BTW9 1192 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 OR51B5Q9H339 312 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 HEY2Q9UBP5 337 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 CDV3Q9UKY7 258 aaKnown RBP10.36□□□□□ -0.75
PFDN1-204ENST00000512707 PCM1Q15154 2024 aa10.36□□□□□ -0.75
PFDN1-204ENST00000512707 GNG14A0A1W2PPG7 69 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 TMEM150CB9EJG8 249 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 ERI3O43414 337 aaKnown RBP10.35□□□□□ -0.75
PFDN1-204ENST00000512707 NRP2O60462 931 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 GUCY1B2O75343 617 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 SH3BGRLO75368 114 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 OR2B3O76000 313 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 PRPS2P11908 318 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 DDX5P17844 614 aaKnown RBP10.35□□□□□ -0.75
PFDN1-204ENST00000512707 CCKBRP32239 447 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 GSTM5P46439 218 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 ITGA1P56199 1179 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 GRM7Q14831 915 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 HERC3Q15034 1050 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 TERF2Q15554 542 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 DEFB110Q30KQ9 67 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 WASHC2DQ5SRD0 308 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 GARNL3Q5VVW2 1013 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 FRMPD2BQ6IN97 320 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 ADNP2Q6IQ32 1131 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 TLDC1Q6P9B6 456 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-204ENST00000512707 Q6ZSR9 355 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 COMMD6Q7Z4G1 85 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 VN1R5Q7Z5H4 357 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 VN1R4Q7Z5H5 301 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 BPHLQ86WA6 291 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-204ENST00000512707 SLITRK4Q8IW52 837 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 METTL4Q8N3J2 472 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 RNF175Q8N4F7 328 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 C1orf52Q8N6N3 182 aaKnown RBP10.35□□□□□ -0.75
PFDN1-204ENST00000512707 TM4SF19Q96DZ7 209 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 FCRL4Q96PJ5 515 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 DEPDC7Q96QD5 511 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 F2RL3Q96RI0 385 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 CMKLR1Q99788 373 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 MRPL1Q9BYD6 325 aaKnown RBP10.35□□□□□ -0.75
PFDN1-204ENST00000512707 SLC7A5P2Q9GIP4 190 aa10.35□□□□□ -0.75
PFDN1-204ENST00000512707 SLC6A16Q9GZN6 736 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms