RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 EIF3EP60228 445 aaKnown RBP8.5□□□□□ -1.05
NUP54-211ENST00000512151 PPIAP62937 165 aaKnown RBP8.5□□□□□ -1.05
NUP54-211ENST00000512151 GSTM4Q03013 218 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 PDK1Q15118 436 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 OASLQ15646 514 aaKnown RBP8.5□□□□□ -1.05
NUP54-211ENST00000512151 CCNG2Q16589 344 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 CYP1B1Q16678 543 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 CCSMST1Q4G0I0 132 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 CATSPEREQ5SY80 951 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 CCDC181Q5TID7 509 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 PRUNE1Q86TP1 453 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 OR2A1Q8NGT9 310 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 OR9A4Q8NGU2 314 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 CFAP61Q8NHU2 1237 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 TSLPQ969D9 159 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 APOL2Q9BQE5 337 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 DRC3Q9H069 523 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 HCN3Q9P1Z3 774 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 B4GALT7Q9UBV7 327 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 MRFAP1Q9Y605 127 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 USF3Q68DE3 2245 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 SCN3AQ9NY46 2000 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 A0A087X1B8 175 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 IGKV1-8A0A0C4DH67 115 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 FEZF1A0PJY2 475 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 H7C0C1 242 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 BCKDKO14874 412 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 DNAJB6O75190 326 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 AP2A2O94973 939 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 FKBP9O95302 570 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 CELA3AP09093 270 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 ETS1P14921 441 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 ATP5OP48047 213 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 TAS2R50P59544 299 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 SRSF2Q01130 221 aaKnown RBP8.49□□□□□ -1.05
NUP54-211ENST00000512151 RHAGQ02094 409 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 DMTNQ08495 405 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 TYSND1Q2T9J0 566 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 DNAJC21Q5F1R6 531 aaKnown RBP8.49□□□□□ -1.05
NUP54-211ENST00000512151 HEPHL1Q6MZM0 1159 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 TRILQ7L0X0 811 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 TAS2R42Q7RTR8 314 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 HIPK1Q86Z02 1210 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 SLC22A15Q8IZD6 547 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 CREB3L4Q8TEY5 395 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 TFB1MQ8WVM0 346 aaKnown RBP8.49□□□□□ -1.05
NUP54-211ENST00000512151 MAIP1Q8WWC4 291 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 DNAJC1Q96KC8 554 aaKnown RBP8.49□□□□□ -1.05
NUP54-211ENST00000512151 QKIQ96PU8 341 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP54-211ENST00000512151 FCRL5Q96RD9 977 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 YIPF4Q9BSR8 244 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 DPH7Q9BTV6 452 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 C19orf24Q9BVV8 132 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 RNF14Q9UBS8 474 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 TGP01266 2768 aa8.49□□□□□ -1.05
NUP54-211ENST00000512151 A0A1B0GVC2 190 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 OR14I1A6ND48 311 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 C5orf60A6NFR6 353 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 HACD1B0YJ81 288 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 CDK2AP1O14519 115 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 PPP1R12AO14974 1030 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 KDM1AO60341 852 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 PHF2O75151 1096 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 IGHG3P01860 377 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 CYC1P08574 325 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ZSCAN5DPP0CG00 497 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ADRA1AP35348 466 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 COILP38432 576 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 PAFAH1B1P43034 410 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 XCR1P46094 333 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 AGTR2P50052 363 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 NR1H2P55055 460 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ACTN3Q08043 901 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 C2orf54Q08AI8 447 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 MPP3Q13368 585 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ABRAXAS2Q15018 415 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 GPR33Q49SQ1 333 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 SYTL3Q4VX76 610 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 GARNL3Q5VVW2 1013 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 DRICH1Q6PGQ1 229 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 DARS2Q6PI48 645 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 BZW1Q7L1Q6 419 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 ZNF572Q7Z3I7 529 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 DCUN1D3Q8IWE4 304 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ZNF567Q8N184 647 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 SPATA4Q8NEY3 305 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 TNIP2Q8NFZ5 429 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 OR51Q1Q8NH59 317 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 LKAAEAR1Q8TD35 194 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 MAGOHBQ96A72 148 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 CCDC138Q96M89 665 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 OR2A5Q96R48 311 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 SECISBP2Q96T21 854 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 LPAR4Q99677 370 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 DDX47Q9H0S4 455 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 ALKBH4Q9NXW9 302 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 SLC39A10Q9ULF5 831 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms