RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KBTBD7Q8WVZ9 684 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ABTB1Q969K4 478 aaPredicted RBP4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 HAUS1Q96CS2 278 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 DNAJC19Q96DA6 116 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ITPKCQ96DU7 683 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ERLEC1Q96DZ1 483 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 LINGO1Q96FE5 620 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 MISP3Q96FF7 219 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PLEKHA8Q96JA3 519 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 SERAC1Q96JX3 654 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZBTB45Q96K62 511 aaPredicted RBP4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PIGQQ9BRB3 760 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 C11orf84Q9BUA3 381 aaPredicted RBP4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PBX4Q9BYU1 374 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 XYLT2Q9H1B5 865 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 NXF3Q9H4D5 531 aaKnown RBP4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 AUNIPQ9H7T9 357 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 CNOT10Q9H9A5 744 aaKnown RBP4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZFP14Q9HCL3 533 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZDHHC4Q9NPG8 344 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 FSCN3Q9NQT6 498 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDYLQ9Y232 598 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 SIP14410 1827 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 LOXHD1Q8IVV2 1947 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TANC1Q9C0D5 1861 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1W2PQ27 194 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1W2PQ64 194 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1W2PQD8 194 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 NDUFA2O43678 99 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 AVILO75366 819 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SUN1O94901 812 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZBTB11O95625 1053 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 OXSR1O95747 527 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ABHD16AO95870 558 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MT-ND2P03891 347 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RPLP2P05387 115 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RHOP08100 348 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GSTA1P08263 222 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CYP3A5P20815 502 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HNF1AP20823 631 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CD80P33681 288 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 NRG3P56975 720 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACTBP60709 375 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACTA2P62736 377 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RPS15P62841 145 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACTG1P63261 375 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACTG2P63267 376 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACTC1P68032 377 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACTA1P68133 377 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CSNK2A1P68400 391 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MRPS25P82663 173 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TGFBIQ15582 683 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TSC22D1Q15714 1073 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF568Q3ZCX4 644 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FBLN7Q53RD9 439 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRRT3Q5FWE3 981 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 EEF1DP3Q658K8 133 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 NCR3LG1Q68D85 454 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 DUPD1Q68J44 220 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RGS7BPQ6MZT1 257 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 LUZP2Q86TE4 346 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RBM45Q8IUH3 476 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PSD4Q8NDX1 1056 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM161BQ8NDZ6 487 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CSNK2A3Q8NEV1 391 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR13F1Q8NGS4 319 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPX8Q8TED1 209 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSD17B8Q92506 261 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TOP1MTQ969P6 601 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 BSCL2Q96G97 398 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC41A3Q96GZ6 507 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 THOC3Q96J01 351 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 LRIG1Q96JA1 1093 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 LURAP1Q96LR2 239 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZFP42Q96MM3 310 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PANX3Q96QZ0 392 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HAPLN3Q96S86 360 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SYT15Q9BQS2 421 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MCMBPQ9BTE3 642 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ADI1Q9BV57 179 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MECRQ9BV79 373 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TIPINQ9BVW5 301 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PAPOLGQ9BWT3 736 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC6A16Q9GZN6 736 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HRH4Q9H3N8 390 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GOLPH3Q9H4A6 298 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM185BQ9H7F4 350 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CCNB1IP1Q9NPC3 277 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLAMF7Q9NQ25 335 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 YAE1D1Q9NRH1 226 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPATCH2Q9NW75 528 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 NDE1Q9NXR1 346 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ALKBH4Q9NXW9 302 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 KCMF1Q9P0J7 381 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 C3orf18Q9UK00 162 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms