RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RPS15AP62244 130 aaKnown RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 SNRPNP63162 240 aaKnown RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 PRAMEP78395 509 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 TSTA3Q13630 321 aaPredicted RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 PCBP2Q15366 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
RNF4-216ENST00000511859 CCDC38Q502W7 563 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 RIPPLY2Q5TAB7 128 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 MEI1Q5TIA1 1274 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 ZNF534Q76KX8 674 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 MDGA2Q7Z553 956 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 SLC22A16Q86VW1 577 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 SHISA5Q8N114 240 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 CAMKVQ8NCB2 501 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 TSLPQ969D9 159 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 SMC6Q96SB8 1091 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 FAM129AQ9BZQ8 928 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 GOLPH3Q9H4A6 298 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 LZTFL1Q9NQ48 299 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 LANCL2Q9NS86 450 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 PIH1D1Q9NWS0 290 aaKnown RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 TRMT1Q9NXH9 659 aaKnown RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 GUCA1BQ9UMX6 200 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 RUVBL2Q9Y230 463 aaKnown RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 PPP2R2CQ9Y2T4 447 aa10.79□□□□□ -0.68
RNF4-216ENST00000511859 CHD3Q12873 2000 aaKnown RBP10.79□□□□□ -0.68
RNF4-216ENST00000511859 H7BY64 318 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 MYO1CO00159 1063 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 PJA2O43164 708 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 CDC123O75794 336 aaPredicted RBP10.78□□□□□ -0.68
RNF4-216ENST00000511859 IGHG3P01860 377 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 GABRA1P14867 456 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 CD53P19397 219 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 JAK1P23458 1154 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 ADRA1DP25100 572 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 ATP5DP30049 168 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 PNLIPRP1P54315 467 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 PLGLB1Q02325 96 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 ACVR1Q04771 509 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 KIF5AQ12840 1032 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 CDH17Q12864 832 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 SEMA3AQ14563 771 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 P3H1Q32P28 736 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 TSTD2Q5T7W7 516 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 LRRC6Q86X45 466 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 PLD3Q8IV08 490 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 PEX13Q92968 403 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
RNF4-216ENST00000511859 PEX11GQ96HA9 241 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 PRAP1Q96NZ9 151 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 BDH2Q9BUT1 245 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 P2RY12Q9H244 342 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 FAM114A2Q9NRY5 505 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 TMEM184CQ9NVA4 438 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 SLC2A6Q9UGQ3 507 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 ACAD8Q9UKU7 415 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 SLC22A7Q9Y694 548 aa10.78□□□□□ -0.68
RNF4-216ENST00000511859 TUBAL3A6NHL2 446 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 SAGE2PA6NJ88 616 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 HSPB2A8KAH6 182 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 E7ENX8 843 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 AQP7O14520 342 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 SUSD5O60279 629 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 ITGA10O75578 1167 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 METTL18O95568 372 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 FHP07954 510 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 RPS3P23396 243 aaKnown RBP eCLIP10.77□□□□□ -0.68
RNF4-216ENST00000511859 CLCN2P51788 898 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 NR0B1P51843 470 aaKnown RBP10.77□□□□□ -0.68
RNF4-216ENST00000511859 HADHBP55084 474 aaKnown RBP10.77□□□□□ -0.68
RNF4-216ENST00000511859 TAP2Q03519 686 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 HSPB2Q16082 182 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 FBXL19-AS1Q494R0 122 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 C1orf185Q5T7R7 199 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 WLSQ5T9L3 541 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 NDUFAF5Q5TEU4 345 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 CAPN12Q6ZSI9 719 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 VN1R4Q7Z5H5 301 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 SLC13A5Q86YT5 568 aaPredicted RBP10.77□□□□□ -0.68
RNF4-216ENST00000511859 P3H2Q8IVL5 708 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 CYP4X1Q8N118 509 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 PSD4Q8NDX1 1056 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 NFAM1Q8NET5 270 aaPredicted RBP10.77□□□□□ -0.68
RNF4-216ENST00000511859 SARAFQ96BY9 339 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 TBC1D20Q96BZ9 403 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 TM4SF19Q96DZ7 209 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 DEPPQ9NTK1 212 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 CATSPERZQ9NTU4 200 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 R3HDM2Q9Y2K5 976 aaKnown RBP10.77□□□□□ -0.68
RNF4-216ENST00000511859 NAALAD2Q9Y3Q0 740 aa10.77□□□□□ -0.68
RNF4-216ENST00000511859 INAFM1C9JVW0 142 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 SMAPO00193 183 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 DVL2O14641 736 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 CD3EAPO15446 510 aaKnown RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 RDH16O75452 317 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 PSIP1O75475 530 aaKnown RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 CATP04040 527 aaKnown RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 FREM3P0C091 2139 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 ASCL1P50553 236 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms