RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 MAGEA11P43364 429 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ATP5OP48047 213 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ENTPD1P49961 510 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 CCL11P51671 97 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 PDX1P52945 283 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 IRX1P78414 480 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 FOXF2Q12947 444 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 DMP1Q13316 513 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 SNX1Q13596 522 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 RFTN1Q14699 578 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 KLHL40Q2TBA0 621 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ARMCX4Q5H9R4 360 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 NDUFAF5Q5TEU4 345 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ARHGEF16Q5VV41 709 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ARHGAP17Q68EM7 881 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 SYCE2Q6PIF2 218 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 FAM159AQ6UWV7 190 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 PACS1Q6VY07 963 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ZNF704Q6ZNC4 412 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 ERASQ7Z444 233 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 CTAGE6Q86UF2 777 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 CTAGE4Q8IX94 777 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 STKLD1Q8NE28 680 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 BRSK1Q8TDC3 778 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 UBTD2Q8WUN7 234 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 TMEM255BQ8WV15 326 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 PIBF1Q8WXW3 757 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 TSACCQ96A04 125 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 TMEM19Q96HH6 336 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 THOC3Q96J01 351 aaKnown RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 RPGRIP1Q96KN7 1286 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 GPR137Q96N19 417 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 PSKH2Q96QS6 385 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 CCDC3Q9BQI4 270 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ZPBPQ9BS86 351 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ALKBH7Q9BT30 221 aaPredicted RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 ZMYND12Q9H0C1 365 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 C5orf66Q9H5L9 145 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 TLE6Q9H808 572 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 GTSE1Q9NYZ3 720 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 NARFQ9UHQ1 456 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 ATP6V1HQ9UI12 483 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 MRPS7Q9Y2R9 242 aaKnown RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
MATR3-216ENST00000511249 RAD54L2Q9Y4B4 1467 aa4.47□□□□□ -1.69
MATR3-216ENST00000511249 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 POLA1P09884 1462 aaPredicted RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 LRPPRCP42704 1394 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 TONSLQ96HA7 1378 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 C15orf38-AP3S2A0A0A6YYH1 394 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ZCWPW2A0A1B0GU75 182 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 SMIM35A0A1B0GVV1 85 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 A0A1W2PRB8 838 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ANTXRLA6NF34 631 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 E5RGE8 158 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 TBX19O60806 448 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 PIGNO95427 931 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 RAF1P04049 648 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 TPM3P06753 285 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 SFTPBP07988 381 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ASNSP08243 561 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 F3P13726 295 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 GM2AP17900 193 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 PAICSP22234 425 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 IL4RP24394 825 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ITGA3P26006 1051 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ADRA1AP35348 466 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 MTIF2P46199 727 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 PEX5P50542 639 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ISL1P61371 349 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 HERV-K104P63124 156 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 RPP38P78345 283 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 ZXDBP98169 803 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 KLC1Q07866 573 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 CDH18Q13634 790 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 DDX39BQ13838 428 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 ZNF234Q14588 700 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 PHKG1Q16816 387 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ADPRMQ3LIE5 342 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ODF3L2Q3SX64 289 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 KCTD21Q4G0X4 260 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 TMEM35AQ53FP2 167 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 CMPK2Q5EBM0 449 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 FSCBQ5H9T9 825 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 NKAIN2Q5VXU1 208 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 NCR3LG1Q68D85 454 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 UGT3A1Q6NUS8 523 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 CCNI2Q6ZMN8 369 aaPredicted RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 LRRC17Q8N6Y2 441 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ZNF548Q8NEK5 533 aaPredicted RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 U2AF1L4Q8WU68 220 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 LPAR1Q92633 364 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 ABTB1Q969K4 478 aaPredicted RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 AZIN2Q96A70 460 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 RBM41Q96IZ5 413 aaKnown RBP4.46□□□□□ -1.7
MATR3-216ENST00000511249 SGK494Q96LW2 274 aa4.46□□□□□ -1.7
MATR3-216ENST00000511249 SECISBP2Q96T21 854 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms