RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 TRAPPC10P48553 1259 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 FMO5P49326 533 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 OVGP1Q12889 678 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 MAPRE1Q15691 268 aaKnown RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 POM121L1PQ3SYA9 428 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 ZNF542PQ5EBM4 170 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 ARHGAP11AQ6P4F7 1023 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 PRPF39Q86UA1 669 aaKnown RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 SLC34A3Q8N130 599 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 LRRC52Q8N7C0 313 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 TEX19Q8NA77 164 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 PDCD6IPQ8WUM4 868 aaKnown RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 ABTB1Q969K4 478 aaPredicted RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 SLC2A11Q9BYW1 496 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 KCNN2Q9H2S1 579 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 ESRP2Q9H6T0 727 aaKnown RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 CNGB3Q9NQW8 809 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 PISDQ9UG56 409 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 SUN2Q9UH99 717 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 LSM7Q9UK45 103 aaKnown RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 SCML1Q9UN30 329 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 NEMP2A6NFY4 417 aa6□□□□□ -1.45
USP53-206ENST00000510737 LILRA5A6NI73 299 aa6□□□□□ -1.45
USP53-206ENST00000510737 CPLX1O14810 134 aa6□□□□□ -1.45
USP53-206ENST00000510737 GOT1P17174 413 aa6□□□□□ -1.45
USP53-206ENST00000510737 WARSP23381 471 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 CHATP28329 748 aa6□□□□□ -1.45
USP53-206ENST00000510737 ALDH4A1P30038 563 aa6□□□□□ -1.45
USP53-206ENST00000510737 ETV5P41161 510 aa6□□□□□ -1.45
USP53-206ENST00000510737 TFAMQ00059 246 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 EIF3IQ13347 325 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 CST6Q15828 149 aa6□□□□□ -1.45
USP53-206ENST00000510737 LACTB2Q53H82 288 aaPredicted RBP6□□□□□ -1.45
USP53-206ENST00000510737 IRAK1BP1Q5VVH5 260 aa6□□□□□ -1.45
USP53-206ENST00000510737 ADALQ6DHV7 355 aa6□□□□□ -1.45
USP53-206ENST00000510737 PAQR9Q6ZVX9 377 aa6□□□□□ -1.45
USP53-206ENST00000510737 CHST9Q7L1S5 443 aa6□□□□□ -1.45
USP53-206ENST00000510737 TIPARPQ7Z3E1 657 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 MMAAQ8IVH4 418 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 CCDC83Q8IWF9 413 aa6□□□□□ -1.45
USP53-206ENST00000510737 SYT2Q8N9I0 419 aaPredicted RBP6□□□□□ -1.45
USP53-206ENST00000510737 GTF3C6Q969F1 213 aa6□□□□□ -1.45
USP53-206ENST00000510737 ZC3HAV1LQ96H79 300 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 JAKMIP1Q96N16 626 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 F2RL3Q96RI0 385 aa6□□□□□ -1.45
USP53-206ENST00000510737 OMDQ99983 421 aa6□□□□□ -1.45
USP53-206ENST00000510737 MRPL45Q9BRJ2 306 aaKnown RBP6□□□□□ -1.45
USP53-206ENST00000510737 DPEP3Q9H4B8 488 aa6□□□□□ -1.45
USP53-206ENST00000510737 EPB41L5Q9HCM4 733 aa6□□□□□ -1.45
USP53-206ENST00000510737 CYTH4Q9UIA0 394 aa6□□□□□ -1.45
USP53-206ENST00000510737 POU2F3Q9UKI9 436 aa6□□□□□ -1.45
USP53-206ENST00000510737 TP53TG5Q9Y2B4 290 aa6□□□□□ -1.45
USP53-206ENST00000510737 STYXL1Q9Y6J8 313 aa6□□□□□ -1.45
USP53-206ENST00000510737 UBE4BO95155 1302 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 VWA3AA6NCI4 1184 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 SERINC4A6NH21 518 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 TCP11X1B4DZS4 312 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 F5H423 210 aaPredicted RBP5.99□□□□□ -1.45
USP53-206ENST00000510737 PRAMEF26H0Y7S4 382 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 BEST1O76090 585 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 KRT19P08727 400 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 LIFP15018 202 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 CHKAP35790 457 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 KRT2P35908 639 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 GNL1P36915 607 aaPredicted RBP5.99□□□□□ -1.45
USP53-206ENST00000510737 RBP5P82980 135 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 POU5F1Q01860 360 aaKnown RBP5.99□□□□□ -1.45
USP53-206ENST00000510737 DHX8Q14562 1220 aaKnown RBP5.99□□□□□ -1.45
USP53-206ENST00000510737 POSTNQ15063 836 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 C9orf64Q5T6V5 341 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 BLOC1S2Q6QNY1 142 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 MCEMP1Q8IX19 187 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP53-206ENST00000510737 C1orf87Q8N0U7 546 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 SLC22A18ASQ8N1D0 253 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 DDI1Q8WTU0 396 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 ZNF274Q96GC6 653 aaPredicted RBP5.99□□□□□ -1.45
USP53-206ENST00000510737 CCDC3Q9BQI4 270 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 TIPINQ9BVW5 301 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 ELOVL4Q9GZR5 314 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 NMUR1Q9HB89 426 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 PCDH9Q9HC56 1237 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 PLCB1Q9NQ66 1216 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 SMYD2Q9NRG4 433 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 COMMD8Q9NX08 183 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 TACC2O95359 2948 aa5.99□□□□□ -1.45
USP53-206ENST00000510737 IGKV3D-15A0A087WSY6 115 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 A0A1W2PQM1 296 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 PP2D1A8MPX8 630 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 ZNF500O60304 480 aaPredicted RBP5.98□□□□□ -1.45
USP53-206ENST00000510737 G6PDP11413 515 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 FDPSP14324 419 aaKnown RBP5.98□□□□□ -1.45
USP53-206ENST00000510737 XBP1P17861 261 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 S1PR1P21453 382 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 DRD3P35462 400 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 METAP1P53582 386 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 PITX1P78337 314 aaPredicted RBP5.98□□□□□ -1.45
USP53-206ENST00000510737 CCL7P80098 99 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 GOLGA8DPQ0D2H9 430 aa5.98□□□□□ -1.45
USP53-206ENST00000510737 TRIM14Q14142 442 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms