RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 RUNX2Q13950 521 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 NDUFA9Q16795 377 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 FAM83EQ2M2I3 478 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 NADK2Q4G0N4 442 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 GOLGA7Q7Z5G4 137 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 TCAIMQ8N3R3 496 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 PTGR2Q8N8N7 351 aaPredicted RBP12.82□□□□□ -0.36
SNF8-206ENST00000509989 EPS8L3Q8TE67 593 aaKnown RBP12.82□□□□□ -0.36
SNF8-206ENST00000509989 UBLCP1Q8WVY7 318 aaPredicted RBP12.82□□□□□ -0.36
SNF8-206ENST00000509989 CCT6BQ92526 530 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 ZBTB9Q96C00 473 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 PHF21BQ96EK2 531 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 WDR34Q96EX3 536 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 MVB12AQ96EY5 273 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 SCYL1Q96KG9 808 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 SLC25A23Q9BV35 468 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 FAM117AQ9C073 453 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 VN1R1Q9GZP7 353 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 ANKHQ9HCJ1 492 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 ZBTB26Q9HCK0 441 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 LANCL2Q9NS86 450 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 CDC14AQ9UNH5 594 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 SLC22A7Q9Y694 548 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 IKBKGQ9Y6K9 419 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 H0YIG0 161 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 K7EPI3 171 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 OR7A17O14581 309 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 CLGNO14967 610 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 KRT38O76015 456 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 IPO13O94829 963 aaKnown RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 COX6A1P12074 109 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 GFAPP14136 432 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 PLA2G2AP14555 144 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 ALOX12P18054 663 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 TSPAN8P19075 237 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 ST13P50502 369 aaKnown RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 BTG2P78543 158 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 IRF8Q02556 426 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 E2F2Q14209 437 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 LACTB2Q53H82 288 aaPredicted RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 LRRC70Q7Z2Q7 622 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 TMEM52Q8NDY8 209 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 TSLPQ969D9 159 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 PTCD3Q96EY7 689 aaKnown RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 QRFPRQ96P65 431 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 F2RL3Q96RI0 385 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 SORBS1Q9BX66 1292 aaKnown RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 TGIF2Q9GZN2 237 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 ZNF552Q9H707 407 aaPredicted RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 CNOT10Q9H9A5 744 aaKnown RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 ZNF160Q9HCG1 818 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 MKKSQ9NPJ1 570 aaPredicted RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 GPRC5BQ9NZH0 403 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 COPG2Q9UBF2 871 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 OPTCQ9UBM4 332 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 TUBD1Q9UJT1 453 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 MKL2Q9ULH7 1088 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 RNF11Q9Y3C5 154 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 SHANK1Q9Y566 2161 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 HELZ2Q9BYK8 2649 aaKnown RBP12.81□□□□□ -0.36
SNF8-206ENST00000509989 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
SNF8-206ENST00000509989 NBASA2RRP1 2371 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 LRIT2A6NDA9 550 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 MKRN2OSH3BPM6 223 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 SAP18O00422 153 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 RTCAO00442 366 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 E2F3O00716 465 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 SUV39H1O43463 412 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 H2AFYO75367 372 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 SLU7O95391 586 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 HEXBP07686 556 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 SERPINA6P08185 405 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 EEF1DP29692 281 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 HSD17B3P37058 310 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 HNRNPFP52597 415 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 ALDH18A1P54886 795 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 BTN3A2P78410 334 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 RGS1Q08116 209 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 PCOLCEQ15113 449 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 PCBP2Q15366 365 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNF8-206ENST00000509989 ERCC6LQ2NKX8 1250 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 TMEM205Q6UW68 189 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 SH2D5Q6ZV89 423 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 MED25Q71SY5 747 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 PRICKLE2Q7Z3G6 844 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 CA13Q8N1Q1 262 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 GALNT16Q8N428 558 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 TMEM102Q8N9M5 508 aaPredicted RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 OR52B6Q8NGF0 335 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 WDR77Q9BQA1 342 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms