RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 THAP11Q96EK4 314 aa10.28□□□□□ -0.76
RNF4-212ENST00000509258 PDLIM5Q96HC4 596 aaKnown RBP10.28□□□□□ -0.76
RNF4-212ENST00000509258 FAM129AQ9BZQ8 928 aa10.28□□□□□ -0.76
RNF4-212ENST00000509258 PCBD2Q9H0N5 130 aa10.28□□□□□ -0.76
RNF4-212ENST00000509258 KLHL31Q9H511 634 aa10.28□□□□□ -0.76
RNF4-212ENST00000509258 MTO1Q9Y2Z2 717 aaKnown RBP10.28□□□□□ -0.76
RNF4-212ENST00000509258 NAALAD2Q9Y3Q0 740 aa10.28□□□□□ -0.76
RNF4-212ENST00000509258 CACNA1CQ13936 2221 aa10.27□□□□□ -0.76
RNF4-212ENST00000509258 TRGV8A0A0C4DH27 118 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 OR5H15A6NDH6 313 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 OR1F1O43749 312 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 CDC123O75794 336 aaPredicted RBP10.27□□□□□ -0.77
RNF4-212ENST00000509258 UNC5CO95185 931 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 WDPCPO95876 746 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 C8orf89P0DMQ9 161 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 PTGER4P35408 488 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 GRK3P35626 688 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 GDF5P43026 501 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 SCTRP47872 440 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 AGTR2P50052 363 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 GPX6P59796 221 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 SKP1P63208 163 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 REEP5Q00765 189 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 TSNQ15631 228 aaKnown RBP10.27□□□□□ -0.77
RNF4-212ENST00000509258 MINDY4Q4G0A6 757 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 MFSD4BQ5TF39 518 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 ADNP2Q6IQ32 1131 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 RPTNQ6XPR3 784 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 GDF7Q7Z4P5 450 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 ANKRD37Q7Z713 158 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 PALM2Q8IXS6 379 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 ZBED8Q8IZ13 594 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 CAMKVQ8NCB2 501 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 SLC13A3Q8WWT9 602 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 ITLN2Q8WWU7 325 aaPredicted RBP10.27□□□□□ -0.77
RNF4-212ENST00000509258 SLC5A11Q8WWX8 675 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 LRRC39Q96DD0 335 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 PEX11GQ96HA9 241 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 VPS39Q96JC1 886 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 CYTH2Q99418 400 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 SARGQ9BW04 601 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 CHST11Q9NPF2 352 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 ZFATQ9P243 1243 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 CORO1CQ9ULV4 474 aaPredicted RBP10.27□□□□□ -0.77
RNF4-212ENST00000509258 SLC22A14Q9Y267 594 aa10.27□□□□□ -0.77
RNF4-212ENST00000509258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.27□□□□□ -0.77
RNF4-212ENST00000509258 NCOA6Q14686 2063 aaPredicted RBP10.27□□□□□ -0.77
RNF4-212ENST00000509258 ZNF407Q9C0G0 2248 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 TRBC2A0A5B9 178 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 TAPBPO15533 448 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 PHGDHO43175 533 aaKnown RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 NDUFS4O43181 175 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 GALR3O60755 368 aaPredicted RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 FAM155BO75949 473 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 TBX6O95947 436 aaPredicted RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 ZNF888P0CJ79 500 aaPredicted RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 CCND1P24385 295 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 SLC6A12P48065 614 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 CCR8P51685 355 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 AP1S2P56377 157 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 PMP22Q01453 160 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 EFTUD2Q15029 972 aaKnown RBP eCLIP10.26□□□□□ -0.771e-7■■■□□ 16.7
RNF4-212ENST00000509258 DEFB134Q4QY38 66 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 NIPAL1Q6NVV3 410 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 ZDHHC24Q6UX98 284 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 BNC2Q6ZN30 1099 aaPredicted RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 CPEB2Q7Z5Q1 589 aaKnown RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 TMPRSS11BQ86T26 416 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 THOC6Q86W42 341 aaKnown RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 ZNF808Q8N4W9 903 aaPredicted RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 FAM98AQ8NCA5 519 aaKnown RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 SPATA4Q8NEY3 305 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 UTP15Q8TED0 518 aaKnown RBP10.26□□□□□ -0.77
RNF4-212ENST00000509258 CREB3L4Q8TEY5 395 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 ESAMQ96AP7 390 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 CCDC120Q96HB5 630 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 ZNF354BQ96LW1 612 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 TMEM79Q9BSE2 394 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 HAUS8Q9BT25 410 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 RHOJQ9H4E5 214 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 ANKHQ9HCJ1 492 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 SAYSD1Q9NPB0 183 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 SEC14L3Q9UDX4 400 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 ASB1Q9Y576 335 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
RNF4-212ENST00000509258 POLQO75417 2590 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 F8P00451 2351 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 C2CD3Q4AC94 2353 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 FBN2P35556 2912 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 DNAJC13O75165 2243 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 CCDC168Q8NDH2 2452 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 FAM227AF5H4B4 570 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 TGFBR3LH3BV60 316 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 CCL21O00585 134 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 CHST10O43529 356 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 PRAMEF2O60811 474 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 SERPIND1P05546 499 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 ENO2P09104 434 aaPredicted RBP10.25□□□□□ -0.77
RNF4-212ENST00000509258 HIST1H2AGP0C0S8 130 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms