RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 OARD1Q9Y530 152 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 KLF2Q9Y5W3 355 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 ITPR2Q14571 2701 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 CACNA1DQ01668 2161 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 CHST10O43529 356 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 BANF1O75531 89 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 STATHP02808 62 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 CELA2AP08217 269 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 RNH1P13489 461 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 EEF1DP29692 281 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 ITGA8P53708 1063 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 GNG11P61952 73 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 REEP5Q00765 189 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 ART3Q13508 389 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 TUBA3CQ13748 450 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 RCN2Q14257 317 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 NAA30Q147X3 362 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 DEFB134Q4QY38 66 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 CDKL4Q5MAI5 379 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 TUBA3EQ6PEY2 450 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 NXPE4Q6UWF7 544 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 ZC3HC1Q86WB0 502 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 KLHL7Q8IXQ5 586 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 EID3Q8N140 333 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 BEST3Q8N1M1 668 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 KRT78Q8N1N4 520 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 THAP3Q8WTV1 239 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 TSPAN17Q96FV3 270 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 FAR2Q96K12 515 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 OR4K3Q96R72 315 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 OLFM1Q99784 485 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 EGFL8Q99944 293 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 MACROD1Q9BQ69 325 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 NPLQ9BXD5 320 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 SLC6A16Q9GZN6 736 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 PRDM9Q9NQV7 894 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 LANCL2Q9NS86 450 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 MOCS1Q9NZB8 636 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 TXNDC16Q9P2K2 825 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 CTNNAL1Q9UBT7 734 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 SH2B3Q9UQQ2 575 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 MMACHCQ9Y4U1 282 aa12.79□□□□□ -0.36
CCHCR1-227ENST00000508852 IGHV3-20A0A0C4DH32 117 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 FAM95CA0A1B0GW59 222 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 EFCAB8A8MWE9 144 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 E7ESA3 106 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 FCHO1O14526 889 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 UNC5CO95185 931 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 EFNA3P52797 238 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 SLC26A5P58743 744 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 POU4F1Q01851 419 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CALCOCO2Q13137 446 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 RBBP5Q15291 538 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 TERF2Q15554 542 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 OR1C1Q15619 314 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CATSPEREQ5SY80 951 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 HIST2H2BCQ6DN03 193 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 TRMT10BQ6PF06 316 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 MAATS1Q7Z4T9 603 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 RPS19BP1Q86WX3 136 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 TICAM1Q8IUC6 712 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CRLF3Q8IUI8 442 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 KLHDC8AQ8IYD2 350 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 ELP5Q8TE02 316 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 UTP15Q8TED0 518 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 SCMH1Q96GD3 660 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CAPZA3Q96KX2 299 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 PTCHD1Q96NR3 888 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 RHOJQ9H4E5 214 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 NT5DC2Q9H857 520 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 GPRC5BQ9NZH0 403 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 MRPS33Q9Y291 106 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
CCHCR1-227ENST00000508852 TRGV8A0A0C4DH27 118 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 ASPDHA6ND91 283 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 SAGE2PA6NJ88 616 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 CLDN4O14493 209 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 EIF3HO15372 352 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 ZG16O60844 167 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 CDC123O75794 336 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 F10P00742 488 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 GSTA2P09210 222 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF888P0CJ79 500 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 C1GALT1C1LP0DN25 315 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 AGAP20933 346 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 SAT1P21673 171 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 CD96P40200 585 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 CA7P43166 264 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 KCNK10P57789 538 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 ALDH6A1Q02252 535 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 OC90Q02509 493 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 TGM3Q08188 693 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 C1QL3Q5VWW1 255 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF787Q6DD87 383 aa12.77□□□□□ -0.37
CCHCR1-227ENST00000508852 XKRXQ6PP77 449 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms