RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ZNF395Q9H8N7 513 aaPredicted RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 ACSS2Q9NR19 701 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 ASIC5Q9NY37 505 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 VPS29Q9UBQ0 182 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 KLHL3Q9UH77 587 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 KLHL20Q9Y2M5 609 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 WBP11Q9Y2W2 641 aaKnown RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 TMED5Q9Y3A6 229 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 DCHS1Q96JQ0 3298 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 KNTC1P50748 2209 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 A0A088AWK7 358 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 LOC105369274A0A096LPK9 316 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 LOC102723532A0A0G2JNH3 316 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 A0A0J9YVX5 310 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 GMNCA6NCL1 334 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 TMEM233B4DJY2 109 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 H0YIG0 161 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PLD2O14939 933 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 LSM1O15116 133 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 NDUFS4O43181 175 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 RGS14O43566 566 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PRAMEF10O60809 474 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 CRCPO75575 148 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 OR2B3O76000 313 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 ZNF10P21506 573 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 ARL1P40616 181 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 MRPL19P49406 292 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 SEPHS1P49903 392 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 TGM3Q08188 693 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 TBL3Q12788 808 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 MAP7Q14244 749 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 HERC3Q15034 1050 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 KIAA0040Q15053 153 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 RBBP5Q15291 538 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 NDUFA9Q16795 377 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 MUM1Q2TAK8 710 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 WASHC2DQ5SRD0 308 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 TTC19Q6DKK2 380 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 PRMT9Q6P2P2 845 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 ABHD17CQ6PCB6 329 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 EPGNQ6UW88 154 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 CEACAM20Q6UY09 585 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 ZNF517Q6ZMY9 492 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 LARP4Q71RC2 724 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP46-207ENST00000508499 ABHD13Q7L211 337 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PPP1R3BQ86XI6 285 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 MYLK4Q86YV6 388 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 GPR135Q8IZ08 494 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 OR4N4Q8N0Y3 316 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 METTL4Q8N3J2 472 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 ZCCHC7Q8N3Z6 543 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 CSNK1A1LQ8N752 337 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PROKR1Q8TCW9 393 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 ACTRT2Q8TDY3 377 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 CHTF18Q8WVB6 975 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 MS4A6EQ96DS6 147 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PPP3R2Q96LZ3 170 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 KCNC2Q96PR1 638 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 TAAR9Q96RI9 348 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 MTERF1Q99551 399 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 TBCDQ9BTW9 1192 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PRR14Q9BWN1 585 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 NPLQ9BXD5 320 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 ZNF717Q9BY31 904 aaPredicted RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 ACPTQ9BZG2 426 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 SPRY4Q9C004 299 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 ROGDIQ9GZN7 287 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 NRSN2Q9GZP1 204 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 REXO4Q9GZR2 422 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 DDX31Q9H8H2 851 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 FARSBQ9NSD9 589 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 MRGBPQ9NV56 204 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 RIC8BQ9NVN3 520 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PNPOQ9NVS9 261 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 AHSPQ9NZD4 102 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 RARRES3Q9UL19 164 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 WASF3Q9UPY6 502 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 TIMM22Q9Y584 194 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 PCDHGA7Q9Y5G6 932 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 USH1CQ9Y6N9 552 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 SPTBP11277 2137 aa8.22□□□□□ -1.09
USP46-207ENST00000508499 CNOT1A5YKK6 2376 aaKnown RBP8.22□□□□□ -1.09
USP46-207ENST00000508499 A8MU76 341 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 TMEM150CB9EJG8 249 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 FFAR3O14843 346 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 PIP5K1BO14986 540 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 POLR1CO15160 346 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 NVLO15381 856 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 GPR42O15529 346 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 P2RX6O15547 441 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 NSA2O95478 260 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 ALOX12P18054 663 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 CD82P27701 267 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 HNRNPH1P31943 449 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 PPM1FP49593 454 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 HTR6P50406 440 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 RPS13P62277 151 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 TRA2BP62995 288 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms