RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 Q6ZSR9 355 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 USP53Q70EK8 1073 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 TRPM8Q7Z2W7 1104 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 ARHGAP22Q7Z5H3 698 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 SFTPA2Q8IWL1 248 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 ZCCHC7Q8N3Z6 543 aaKnown RBP13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 DNAJC22Q8N4W6 341 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 DNAJB8Q8NHS0 232 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 CREB3L4Q8TEY5 395 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 ZNF285Q96NJ3 590 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 BRINP2Q9C0B6 783 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 WDR55Q9H6Y2 383 aaPredicted RBP13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 SYNDIG1Q9H7V2 258 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 WDR41Q9HAD4 459 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 ANKHQ9HCJ1 492 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 SDR39U1Q9NRG7 319 aaPredicted RBP13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 NDE1Q9NXR1 346 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 PSME2Q9UL46 239 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 SH2B3Q9UQQ2 575 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 BTBD3Q9Y2F9 522 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 CAPN7Q9Y6W3 813 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 OTOGLQ3ZCN5 2332 aa13.76□□□□□ -0.21
HMGCLL1-208ENST00000508459 A0A0J9YVX5 310 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ATP6AP2A0A1C7CYW4 349 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 FITM1A5D6W6 292 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 BBIP1A8MTZ0 92 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 E9PBE3 544 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 H0YGG7 62 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 B3GALT2O43825 422 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 KLHL41O60662 606 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ATP6AP2O75787 350 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 OR2B3O76000 313 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 SCELO95171 688 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 CD63P08962 238 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 CEACAM1P13688 526 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 IL10P22301 178 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 TGM1P22735 817 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 TIA1P31483 386 aaKnown RBP eCLIP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 AVPR1BP47901 424 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 NEK2P51955 445 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 MTTPP55157 894 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 GFERP55789 205 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 C21orf58P58505 322 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ARF3P61204 181 aaPredicted RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 MEF2AQ02078 507 aaPredicted RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 STX5Q13190 355 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 BIKQ13323 160 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 NKAIN2Q5VXU1 208 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 NOXRED1Q6NXP6 359 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 PRMT9Q6P2P2 845 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ANKRD53Q8N9V6 530 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ZNF740Q8NDX6 193 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 VPS37AQ8NEZ2 397 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 MTFMTQ96DP5 389 aaKnown RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ZNF764Q96H86 408 aaPredicted RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 FCRL1Q96LA6 429 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 TEFMQ96QE5 360 aaKnown RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 SERINC2Q96SA4 455 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 C17orf62Q9BQA9 187 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 NDC1Q9BTX1 674 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 B3GNT4Q9C0J1 378 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 DDX31Q9H8H2 851 aaKnown RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 PARD6AQ9NPB6 346 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 FAM86C1Q9NVL1 165 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 AIG1Q9NVV5 245 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 MRPS33Q9Y291 106 aaKnown RBP13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 UNC13CQ8NB66 2214 aa13.75□□□□□ -0.21
HMGCLL1-208ENST00000508459 MUC6Q6W4X9 2439 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 IGHV5-51A0A0C4DH38 117 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 IGHV5-10-1A0A0J9YXX1 117 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 A0A1W2PQM1 296 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 ERI3O43414 337 aaKnown RBP13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 PCDH7O60245 1069 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 CTSVO60911 334 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 TGFB1P01137 390 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 IL6P05231 212 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 ANXA4P09525 319 aaPredicted RBP13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 DRD2P14416 443 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 ALOX12P18054 663 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 JAK1P23458 1154 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 CSF2RBP32927 897 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 BUD31P41223 144 aaPredicted RBP13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 HTR6P50406 440 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 MAPK12P53778 367 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 HMGCS1Q01581 520 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 NHLH1Q02575 133 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 SRSF11Q05519 484 aaKnown RBP13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 ZFP36L1Q07352 338 aaKnown RBP13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 CYP4F3Q08477 520 aa13.74□□□□□ -0.21
HMGCLL1-208ENST00000508459 KRT72Q14CN4 511 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms