RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SHISA9B4DS77 424 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 F8VVB4 439 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 F8VWA3 439 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 PTMAP06454 111 aaKnown RBP3.97□□□□□ -1.77
DHFR-204ENST00000508282 CCDC175P0C221 793 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 ERCC2P18074 760 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 CDC25CP30307 473 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 FAM106AQ4KMX7 169 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 DCLRE1AQ6PJP8 1040 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 PRSS55Q6UWB4 352 aaPredicted RBP3.97□□□□□ -1.77
DHFR-204ENST00000508282 PPP1R21Q6ZMI0 780 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 CDHR3Q6ZTQ4 885 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 METTL23Q86XA0 190 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 HPS6Q86YV9 775 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 FAM219AQ8IW50 185 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 PHC2Q8IXK0 858 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 SLC22A15Q8IZD6 547 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 NUP93Q8N1F7 819 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 CARNMT1Q8N4J0 409 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 CCDC63Q8NA47 563 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 Q8NFD4 153 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 GDAP1Q8TB36 358 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 RSPH1Q8WYR4 309 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 NXPE2Q96DL1 559 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 SIPA1Q96FS4 1042 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 RBM41Q96IZ5 413 aaKnown RBP3.97□□□□□ -1.77
DHFR-204ENST00000508282 GDAP1L1Q96MZ0 367 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 RAB3IPQ96QF0 476 aaPredicted RBP3.97□□□□□ -1.77
DHFR-204ENST00000508282 CITED2Q99967 270 aaPredicted RBP3.97□□□□□ -1.77
DHFR-204ENST00000508282 NAA11Q9BSU3 229 aaPredicted RBP3.97□□□□□ -1.77
DHFR-204ENST00000508282 CHCHD5Q9BSY4 110 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 SLC25A23Q9BV35 468 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 KATNB1Q9BVA0 655 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 FAM129AQ9BZQ8 928 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 SNX25Q9H3E2 840 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 NLGN3Q9NZ94 848 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 TP53TG3Q9ULZ0 132 aa3.97□□□□□ -1.77
DHFR-204ENST00000508282 SLC7A4O43246 635 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 YES1P07947 543 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 EPORP19235 508 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 BCL3P20749 454 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 RGS7P49802 495 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 FCHO2Q0JRZ9 810 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 CAMK2DQ13557 499 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 ZNF146Q15072 292 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 HYAL4Q2M3T9 481 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
DHFR-204ENST00000508282 KRBOX4Q5JUW0 171 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 TTC27Q6P3X3 843 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 PET117Q6UWS5 81 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 RAPH1Q70E73 1250 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 PIGWQ7Z7B1 504 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 AMIGO1Q86WK6 493 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 UNC45BQ8IWX7 931 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 APCDD1Q8J025 514 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 OR52B6Q8NGF0 335 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 MGARPQ8TDB4 240 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 DEPDC1BQ8WUY9 529 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.96□□□□□ -1.78
DHFR-204ENST00000508282 RMDN2Q96LZ7 410 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 POMT2Q9UKY4 750 aa3.96□□□□□ -1.78
DHFR-204ENST00000508282 GPRASP1Q5JY77 1395 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 A0A1W2PPW3 197 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 A8MVM7 634 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 H3BMM5 538 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 TRAFD1O14545 582 aaPredicted RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 WDR46O15213 610 aaKnown RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 MAGEB2O15479 319 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 PRAF2O60831 178 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 LRCH4O75427 683 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 GP5P40197 560 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 ZFP36L2P47974 494 aaKnown RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 NDST2P52849 883 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 FKBP3Q00688 224 aaKnown RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 PEX6Q13608 980 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 TAZQ16635 292 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 FAM174BQ3ZCQ3 159 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 FAM166AQ6J272 317 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 PLBD1Q6P4A8 553 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 MOXD1Q6UVY6 613 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 TIPARPQ7Z3E1 657 aaKnown RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 C5orf24Q7Z6I8 188 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 NRARPQ7Z6K4 114 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 SLC25A42Q86VD7 318 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 CCDC170Q8IYT3 715 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 RPLP0P6Q8NHW5 317 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 CASP10Q92851 521 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 TOMM40LQ969M1 308 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 CCDC43Q96MW1 224 aaKnown RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 NAP1L5Q96NT1 182 aaPredicted RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 ATF6BQ99941 703 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 THUMPD3Q9BV44 507 aaKnown RBP3.95□□□□□ -1.78
DHFR-204ENST00000508282 GPR83Q9NYM4 423 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 GTSE1Q9NYZ3 720 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 STYXL1Q9Y6J8 313 aa3.95□□□□□ -1.78
DHFR-204ENST00000508282 RECQL5O94762 991 aaPredicted RBP3.94□□□□□ -1.78
DHFR-204ENST00000508282 LUC7L3O95232 432 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms