RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 FAM111AQ96PZ2 611 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 LRRC37BQ96QE4 947 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 KCNH6Q9H252 994 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 UGT1A7Q9HAW7 530 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 UGT1A10Q9HAW8 530 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 UGT1A8Q9HAW9 530 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 SNX15Q9NRS6 342 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 TREX1Q9NSU2 369 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 SIDT1Q9NXL6 827 aaKnown RBP6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PSME2Q9UL46 239 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 RAI2Q9Y5P3 530 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 EDDM13A0A1B0GTR0 161 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ZCWPW2A0A1B0GU75 182 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 LOC105371267A0A1B0GV96 52 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PMS2P1A4D2B8 440 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ANKRD66B4E2M5 251 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 TULP3O75386 442 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 DCTN3O75935 186 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
CLCN3-206ENST00000507875 HGFP14210 728 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ALDH3A1P30838 453 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 INHBCP55103 352 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ADARP55265 1226 aaKnown RBP6.87□□□□□ -1.31
CLCN3-206ENST00000507875 MAXP61244 160 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 NCALDP61601 193 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PRR5P85299 388 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ARHGEF7Q14155 803 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 GALNT3Q14435 633 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 BRAT1Q6PJG6 821 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 CDHR3Q6ZTQ4 885 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PHC2Q8IXK0 858 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 C10orf82Q8WW14 230 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PKP4Q99569 1192 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 C1orf21Q9H246 121 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 POMKQ9H5K3 350 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 NLE1Q9NVX2 485 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ELOVL2Q9NXB9 296 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PLLPQ9Y342 182 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 CKAP5Q14008 2032 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 TRAFD1O14545 582 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 MGRN1O60291 552 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 RASAL1O95294 804 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 NR2F1P10589 423 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF30P17039 623 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 OGNP20774 298 aaKnown RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 SPRP35270 261 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 GP5P40197 560 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ELF3P78545 371 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CSTF3Q12996 717 aaKnown RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 SEC23BQ15437 767 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 PRRT3Q5FWE3 981 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CERCAMQ5T4B2 595 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 LYPLAL1Q5VWZ2 237 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 VASNQ6EMK4 673 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF704Q6ZNC4 412 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TRMT11Q7Z4G4 463 aaKnown RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 DSG4Q86SJ6 1040 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 KCNMB4Q86W47 210 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 RALGPS2Q86X27 583 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 UBALD2Q8IYN6 164 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TERB1Q8NA31 727 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF398Q8TD17 642 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 GAL3ST1Q99999 423 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 FUZQ9BT04 418 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 MFSD1Q9H3U5 465 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 OPA3Q9H6K4 179 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TXNDC16Q9P2K2 825 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CLEC4EQ9ULY5 219 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 PLA2G4CQ9UP65 541 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CHKBQ9Y259 395 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 PLXNA2O75051 1894 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 KLF11O14901 512 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF821O75541 412 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 VIPP01282 170 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 PRNPP04156 253 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ARSAP15289 507 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 OPRD1P41143 372 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CASRP41180 1078 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 MC3RP41968 323 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CRADDP78560 199 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ZXDAP98168 799 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 MEF2AQ02078 507 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TAP2Q03519 686 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 SIGLEC14Q08ET2 396 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TRAF2Q12933 501 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CBX3Q13185 183 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CAMK2DQ13557 499 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 THOC5Q13769 683 aaKnown RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ENPP2Q13822 863 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 DLG2Q15700 870 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TCTE1Q5JU00 501 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 GDPD4Q6W3E5 623 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ASRGL1Q7L266 308 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 KLHL29Q96CT2 875 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 CCT7Q99832 543 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 TSSK1BQ9BXA7 367 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 SEMA4BQ9NPR2 832 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 ARHGEF3Q9NR81 526 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 PLK2Q9NYY3 685 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms