RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	NDUFAF7	Q7L592	441 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TAOK1	Q7L7X3	1001 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AFAP1L2	Q8N4X5	818 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	UTP15	Q8TED0	518 aa	Known RBP	13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CREB3L4	Q8TEY5	395 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	VN1R1	Q9GZP7	353 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NUP210L	Q5VU65	1888 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	IGHV3-20	A0A0C4DH32	117 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459		A0A0G2JN53	185 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EXOC1L	A0A1B0GW35	172 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ANKDD1B	A6NHY2	528 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TTLL8	A6PVC2	850 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SYCE1L	A8MT33	242 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CHST10	O43529	356 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KRT38	O76015	456 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SERPINA6	P08185	405 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	FAM153B	P0C7A2	387 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	C8orf89	P0DMQ9	161 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GFAP	P14136	432 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CSRP3	P50461	194 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SOX8	P57073	446 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SKP1	P63208	163 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	IRF8	Q02556	426 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459		Q0VFX4	171 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HYAL2	Q12891	473 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CHIT1	Q13231	466 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	DOC2A	Q14183	400 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	IGFBP7	Q16270	282 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PFKFB4	Q16877	469 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	FAM153C	Q494X1	144 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LANCL3	Q6ZV70	420 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LRRC70	Q7Z2Q7	622 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GSPT2	Q8IYD1	628 aa	Known RBP	13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PLD6	Q8N2A8	252 aa	Known RBP	13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AMER2	Q8N7J2	671 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TTL	Q8NG68	377 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RHEBL1	Q8TAI7	183 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	DCAKD	Q8WVC6	231 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PTCD3	Q96EY7	689 aa	Known RBP	13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SLC6A16	Q9GZN6	736 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LHPP	Q9H008	270 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RHBG	Q9H310	441 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF358	Q9NW07	568 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	C5AR2	Q9P296	337 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CPSF2	Q9P2I0	782 aa	Known RBP	13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	OPTC	Q9UBM4	332 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ANGPTL3	Q9Y5C1	460 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	DOCK10	Q96BY6	2186 aa		13.36	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SCN2A	Q99250	2005 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	IGHV1-45	A0A0A0MS14	117 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TRIM49D1	C9J1S8	452 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459		K7EPI3	171 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RIPK2	O43353	540 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	B4GALT2	O60909	372 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	WISP1	O95388	367 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZIC2	O95409	532 aa	Predicted RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MTHFD2	P13995	350 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EPOR	P19235	508 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CD97	P48960	835 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	STXBP1	P61764	594 aa	Known RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	BTN3A2	P78410	334 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TEX35	Q5T0J7	233 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AGAP7P	Q5VUJ5	663 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HIST2H2AA3	Q6FI13	130 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ADNP2	Q6IQ32	1131 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NIPAL1	Q6NVV3	410 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TMEM205	Q6UW68	189 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HPS6	Q86YV9	775 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KBTBD2	Q8IY47	623 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TEX9	Q8N6V9	391 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	FAR2	Q96K12	515 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SCYL1	Q96KG9	808 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AGAP4	Q96P64	663 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GPR78	Q96P69	363 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AICDA	Q9GZX7	198 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EHD1	Q9H4M9	534 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NT5DC2	Q9H857	520 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SLAMF7	Q9NQ25	335 aa		13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HELZ2	Q9BYK8	2649 aa	Known RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GCN1	Q92616	2671 aa	Known RBP	13.35	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LOC102723996	A0A087X1L8	192 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LRIT2	A6NDA9	550 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	C4orf51	C9J302	202 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PCDH17	O14917	1159 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ERI3	O43414	337 aa	Known RBP	13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SEC24D	O94855	1032 aa	Predicted RBP	13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	UQCRH	P07919	91 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	FH	P07954	510 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CELA2A	P08217	269 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SMIM10L1	P0DMW3	83 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EPB42	P16452	691 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CD22	P20273	847 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CNTF	P26441	200 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HNRNPH1	P31943	449 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms