RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ENO2P09104 434 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 CD46P15529 392 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 JAK1P23458 1154 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 EEF1DP29692 281 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 ELK3P41970 407 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 SCTRP47872 440 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 CASP6P55212 293 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 SKP1P63208 163 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 REEP5Q00765 189 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 ALDH6A1Q02252 535 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 OC90Q02509 493 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 RGS1Q08116 209 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 C3AR1Q16581 482 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 SPINK14Q6IE38 97 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 MTFR2Q6P444 385 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 TRMT10BQ6PF06 316 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 SBSNQ6UWP8 590 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 RPTNQ6XPR3 784 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 BNC2Q6ZN30 1099 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 MCEMP1Q8IX19 187 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 LGI4Q8N135 537 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 KIF2BQ8N4N8 673 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 TMEM178AQ8NBL3 297 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC5A11Q8WWX8 675 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 ATL1Q8WXF7 558 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 MAGED4Q96JG8 741 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 GPR137Q96N19 417 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 FRMD6Q96NE9 622 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 WDR83Q9BRX9 315 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 CDCP1Q9H5V8 836 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 ZFP69BQ9UJL9 534 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 TINAGQ9UJW2 476 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 CORO1CQ9ULV4 474 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 VWA7Q9Y334 891 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 DYRK1BQ9Y463 629 aa10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 KLF2Q9Y5W3 355 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-204ENST00000507293 CTAGE15A4D2H0 777 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 ASPDHA6ND91 283 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 NPIPA5E9PKD4 350 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 NDC80O14777 642 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 NEURL1O76050 574 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 IVDP26440 423 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 HTR1EP28566 365 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 AHRP35869 848 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 HNF4AP41235 474 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 RAB8AP61006 207 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 BTG2P78543 158 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 ADORA2A-AS1P86434 159 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 GTF3C1Q12789 2109 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 CSHL1Q14406 222 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 CRYBG3Q68DQ2 2970 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 NIPAL1Q6NVV3 410 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 ABHD13Q7L211 337 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 GALNTL5Q7Z4T8 443 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 STRA8Q7Z7C7 330 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 TMPRSS11BQ86T26 416 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 CTAGE6Q86UF2 777 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 CYP4X1Q8N118 509 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 PDIK1LQ8N165 341 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 ELP5Q8TE02 316 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 UTP15Q8TED0 518 aaKnown RBP10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 THAP3Q8WTV1 239 aaPredicted RBP10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 SLCO2A1Q92959 643 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 PTCHD1Q96NR3 888 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 RUBCNLQ9H714 662 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 PELI2Q9HAT8 420 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 LRFN1Q9P244 771 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 NPIPA1Q9UND3 350 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 CELSR2Q9HCU4 2923 aa10.83□□□□□ -0.68
HMGCS1-204ENST00000507293 NPEPPSL1A6NEC2 478 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 SAGE2PA6NJ88 616 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 CDC7O00311 574 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 MLYCDO95822 493 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 SP1P08047 785 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 SNRPB2P08579 225 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF37AP17032 561 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 MAOAP21397 527 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 SAT1P21673 171 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 TPP2P29144 1249 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 HYAL2Q12891 473 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 MORF4L2Q15014 288 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 RBBP5Q15291 538 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 PPP1R3AQ16821 1122 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 KRTCAP3Q53RY4 240 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 TOR1AIP1Q5JTV8 583 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF468Q5VIY5 522 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 STEAP4Q687X5 459 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 SLC25A25Q6KCM7 469 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 QSOX2Q6ZRP7 698 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 THOC6Q86W42 341 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 RPS19BP1Q86WX3 136 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ANKMY2Q8IV38 441 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 KLHL7Q8IXQ5 586 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 HORMAD2Q8N7B1 307 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ANKRD53Q8N9V6 530 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 FAM98AQ8NCA5 519 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 PDLIM5Q96HC4 596 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 AIF1LQ9BQI0 150 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms