RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DNAJB6O75190 326 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 SEMA7AO75326 666 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 SERPINA6P08185 405 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 CCDC166P0CW27 439 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 C1GALT1C1LP0DN25 315 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 ICAM2P13598 275 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 CD1DP15813 335 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 STMN1P16949 149 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 GDF5P43026 501 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 MAGEA4P43358 317 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 GLRBP48167 497 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 AGTR2P50052 363 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC12A2P55011 1212 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 AP2B1P63010 937 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 RGS1Q08116 209 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 NAB1Q13506 487 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 USP10Q14694 798 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 NR6A1Q15406 480 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 EIF2S3LQ2VIR3 472 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 C18orf21Q32NC0 220 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 KBTBD12Q3ZCT8 623 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 MINDY4Q4G0A6 757 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 DEFB134Q4QY38 66 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 FHL5Q5TD97 284 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 PLAG1Q6DJT9 500 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 NIPAL1Q6NVV3 410 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 H3F3CQ6NXT2 135 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 LINC00696Q6ZRV3 163 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 SPATA6LQ8N4H0 392 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 SIRT6Q8N6T7 355 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 CATSPER1Q8NEC5 780 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 TRPV3Q8NET8 790 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 CREB3L4Q8TEY5 395 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 METTL21AQ8WXB1 218 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 PEX11GQ96HA9 241 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 EGFL8Q99944 293 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 AIF1LQ9BQI0 150 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 RNF32Q9H0A6 362 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 CLK4Q9HAZ1 481 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 PTGFRNQ9P2B2 879 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 C19orf25Q9UFG5 118 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 DYRK1BQ9Y463 629 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 DYTNA2CJ06 578 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 BLACEA4D250 179 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 PRAMEF4O60810 478 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 FAM155BO75949 473 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 WFS1O76024 890 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 SEC24DO94855 1032 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 WDR47O94967 919 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 TBX6O95947 436 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 B3GALT4O96024 378 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 FHP07954 510 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 NUDT7P0C024 238 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ZNF888P0CJ79 500 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 RNF224P0DH78 156 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 GNAZP19086 355 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 SPRP35270 261 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 TNFSF10P50591 281 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 RAB10P61026 200 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ATP6V0D1P61421 351 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 SKP1P63208 163 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 CDC16Q13042 620 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 E2F2Q14209 437 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ABRAXAS2Q15018 415 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 OR4D1Q15615 310 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 GRTP1Q5TC63 336 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 MFSD4BQ5TF39 518 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 PRAMEF9Q5VWM5 478 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ZNF324BQ6AW86 544 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 FRA10AC1Q70Z53 315 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ABHD13Q7L211 337 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 CTAGE3PQ8IX95 158 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 TCAIMQ8N3R3 496 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 PDPRQ8NCN5 879 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ST6GALNAC3Q8NDV1 305 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 GRHL3Q8TE85 626 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 SSC4DQ8WTU2 575 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 FAR1Q8WVX9 515 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 TSLPQ969D9 159 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 KIAA1191Q96A73 305 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 TBC1D20Q96BZ9 403 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 WDR34Q96EX3 536 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 CNDP1Q96KN2 507 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 SLX1AQ9BQ83 275 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 UNKQ9C0B0 810 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 PITHD1Q9GZP4 211 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 EHD1Q9H4M9 534 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 KLHL31Q9H511 634 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 NT5DC2Q9H857 520 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 AGPAT4Q9NRZ5 378 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 ZDHHC18Q9NUE0 388 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 PLA2G3Q9NZ20 509 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 GPRC5BQ9NZH0 403 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 MAP10Q9P2G4 905 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 TXNDC16Q9P2K2 825 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 PTBP2Q9UKA9 531 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms