RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ZNF10P21506 573 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 AHRP35869 848 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 COILP38432 576 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 PHKG1Q16816 387 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 HSP90AA5PQ58FG0 334 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 ZNF549Q6P9A3 640 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 QSOX2Q6ZRP7 698 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 KIAA0408Q6ZU52 694 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 ABHD11Q8NFV4 315 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 EEF1AKMT1Q8WVE0 214 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 CCDC77Q9BR77 488 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 SARGQ9BW04 601 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 RBCK1Q9BYM8 510 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 SYNPO2LQ9H987 977 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 ZFP69BQ9UJL9 534 aa19.75■□□□□ 0.75
SQSTM1-210ENST00000506042 ZCWPW2A0A1B0GU75 182 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 GOLGA8MH3BSY2 632 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 HAUS5O94927 633 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 HLCSP50747 726 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 BBS9Q3SYG4 887 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 DEFB134Q4QY38 66 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 PPIL6Q8IXY8 311 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 TMEM156Q8N614 296 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 ELP5Q8TE02 316 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 ADAMTS18Q8TE60 1221 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 SDCCAG3Q96C92 435 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 LINGO1Q96FE5 620 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 SNF8Q96H20 258 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 MACROD1Q9BQ69 325 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 AIF1LQ9BQI0 150 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 PRDM9Q9NQV7 894 aa19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 IARS2Q9NSE4 1012 aaKnown RBP19.74■□□□□ 0.75
SQSTM1-210ENST00000506042 ZNF860A6NHJ4 632 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 SAGE2PA6NJ88 616 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 CHST10O43529 356 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 B4GALT2O60909 372 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 NEURL1O76050 574 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 POU3F2P20265 443 aaPredicted RBP19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 PTGS2P35354 604 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 CLCN2P51788 898 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 DHX9Q08211 1270 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 CCDC137Q6PK04 289 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 CDH24Q86UP0 819 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 PDSS2Q86YH6 399 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 ZNF740Q8NDX6 193 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 FAR2Q96K12 515 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 PBKQ96KB5 322 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 MCCC2Q9HCC0 563 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 LANCL2Q9NS86 450 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 MRPS33Q9Y291 106 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 MED16Q9Y2X0 877 aa19.73■□□□□ 0.75
SQSTM1-210ENST00000506042 TPOP07202 933 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 NPPBP16860 134 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TPP2P29144 1249 aaPredicted RBP19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 CXCR5P32302 372 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TRHRP34981 398 aaPredicted RBP19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TLE4Q04727 773 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 RCN2Q14257 317 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TERF2Q15554 542 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 SPANXN3Q5MJ09 141 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 MEX3BQ6ZN04 569 aaKnown RBP19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 AFAP1L2Q8N4X5 818 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 C2CD4AQ8NCU7 369 aaPredicted RBP19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 NT5CQ8TCD5 201 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TRIM51Q9BSJ1 452 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 HES7Q9BYE0 225 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TP63Q9H3D4 680 aaPredicted RBP19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 TIMMDC1Q9NPL8 285 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 KCNE2Q9Y6J6 123 aa19.72■□□□□ 0.75
SQSTM1-210ENST00000506042 ACOT7O00154 380 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 CLDN4O14493 209 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 LCMT2O60294 686 aaKnown RBP19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 ZNF888P0CJ79 500 aaPredicted RBP19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 EFNA3P52797 238 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 ITGA8P53708 1063 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 MLF1P58340 268 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 STXBP1P61764 594 aaKnown RBP19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 PPP1R7Q15435 360 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 ANKRD22Q5VYY1 191 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 ARHGAP11AQ6P4F7 1023 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 SIAH3Q8IW03 269 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 CYP4Z2PQ8N1L4 340 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 C7orf57Q8NEG2 295 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 TTLQ8NG68 377 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 OR4K1Q8NGD4 311 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 SLC5A11Q8WWX8 675 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 TSLPQ969D9 159 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 TRIM45Q9H8W5 580 aaPredicted RBP19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 PPANQ9NQ55 473 aaKnown RBP19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 ADAMTS6Q9UKP5 1117 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 MMACHCQ9Y4U1 282 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 SCN3AQ9NY46 2000 aa19.71■□□□□ 0.75
SQSTM1-210ENST00000506042 H2AFYO75367 372 aaKnown RBP19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 GSTM2P28161 218 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 ILF2Q12905 390 aaKnown RBP19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 PAQR3Q6TCH7 311 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 GALNT7Q86SF2 657 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 DOLPP1Q86YN1 238 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 GPALPP1Q8IXQ4 340 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 CPSF7Q8N684 471 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms