RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PRDX1Q06830 199 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 KRT33BQ14525 404 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 HEPACAMQ14CZ8 416 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 RGNQ15493 299 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 TTC33Q6PID6 262 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 PIWIL3Q7Z3Z3 882 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 VN1R5Q7Z5H4 357 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 PTOV1Q86YD1 416 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 PJA1Q8NG27 643 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 INSM2Q96T92 566 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 SPNS1Q9H2V7 528 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 OSGEPL1Q9H4B0 414 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 TM9SF3Q9HD45 589 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 MIEF1Q9NQG6 463 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 TM7SF3Q9NS93 570 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 ADPRHL2Q9NX46 363 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 SPASTQ9UBP0 616 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 PLAGL1Q9UM63 463 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 AK5Q9Y6K8 562 aa16.55■□□□□ 0.24
TRAPPC11-204ENST00000505676 TICRRQ7Z2Z1 1910 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 A0A087WXM4 84 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TRBC2A0A5B9 178 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 ANTXRLA6NF34 631 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TRIM64A6NGJ6 449 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 GRK3P35626 688 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TAS2R50P59544 299 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZC3H12BQ5HYM0 836 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 STK32CQ86UX6 486 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 NUDT13Q86X67 352 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 PNPT1Q8TCS8 783 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 CYGBQ8WWM9 190 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 RGMAQ96B86 450 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 OR2M4Q96R27 311 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TSC22D3Q99576 134 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 GABARAPL1Q9H0R8 117 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TMEM38AQ9H6F2 299 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 KIR3DX1Q9H7L2 352 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 CARS2Q9HA77 564 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TAS2R9Q9NYW1 312 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 C3orf18Q9UK00 162 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 EXO1Q9UQ84 846 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 ORC6Q9Y5N6 252 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 CROCCQ5TZA2 2017 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 APBB3O95704 486 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 EGFP01133 1207 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TFAP2AP05549 437 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 KLK1P06870 262 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 DDCP20711 480 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 CCNYL2Q5T2Q4 361 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TMEM214Q6NUQ4 689 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZDHHC21Q8IVQ6 265 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 ALDH16A1Q8IZ83 802 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 FAM86B1Q8N7N1 296 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 WDR48Q8TAF3 677 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 DGCR14Q96DF8 476 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 SARGQ9BW04 601 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TMEM184CQ9NVA4 438 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 SUFUQ9UMX1 484 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 PIAS3Q9Y6X2 628 aa16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 MKI67P46013 3256 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-204ENST00000505676 TRIM64CA6NLI5 447 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 TNFRSF10CO14798 259 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 BMP10O95393 424 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 IFNA14P01570 189 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 SEMG1P04279 462 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 RAD23AP54725 363 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 PPP2R2BQ00005 443 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 DLX2Q07687 328 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 SLC14A1Q13336 389 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 GK3PQ14409 553 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 NKG7Q16617 165 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 SHQ1Q6PI26 577 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZNF551Q7Z340 670 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 NEUROD4Q9HD90 331 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 FAF1Q9UNN5 650 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 YY2O15391 372 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 E2F6O75461 281 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 MT-ND1P03886 318 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 FABP3P05413 133 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 RPL10P27635 214 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 HTR1BP28222 390 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 TPP2P29144 1249 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 MAGEA8P43361 318 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 MAPK12P53778 367 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 MEF2AQ02078 507 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 IL18R1Q13478 541 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 NFATC4Q14934 902 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 MLF2Q15773 248 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 LRRC23Q53EV4 343 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 FOXB2Q5VYV0 432 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 ANKRD26P1Q6NSI1 321 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 C10orf111Q8N326 155 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZNF740Q8NDX6 193 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 ZNF555Q8NEP9 628 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 ERLEC1Q96DZ1 483 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 CAAP1Q9H8G2 361 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 IMP3Q9NV31 184 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 WDR37Q9Y2I8 494 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 GPSM3Q9Y4H4 160 aa16.53■□□□□ 0.24
TRAPPC11-204ENST00000505676 A0A1W2PRB8 838 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms